Microsatellites /Tandem Repeats database

Genome: Conexibacter woesei DSM 14684

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
229312CCGCCGGTC-CCGCCGGTC-CCGCCGGTC-CCGCCGGTCDesign primers
360985CGCGGCGGCGGGCGGCGGCGGGTGG-CGCGGCGGCGGGCGGCGGCGGGTGG-CGCGGCGGCGGGCGGCGGCGGGTGG-CGCGGCGGCGGGCGGCGGCGGGTGGDesign primers
372178CGCCGG-CGCCGG-CGCCGG-CGCCGGDesign primers
400135CGCTGGG-CGCTGGG-CGCTGGG-CGCTGGG-CGCTGGG-CGCTGGG-CGCTGGG-CGCTGGG-CGCTGGG-CGCTGGG-CGCTGGGDesign primers
564731CCGCCGCCGCTCGAACCG-CCGCCGCCGCTCGAACCG-CCGCCGCCGCTCGAACCGDesign primers
650355GGTCGACGT-GGTCGACGT-GGTCGACGT-GGTCGACGTDesign primers
910509CGCCGGCCGCGCCCGCCGCCG-CGCCGGCCGCGCCCGCCGCCG-CGCCGGCCGCGCCCGCCGCCGDesign primers
965338CCGCTCAGCCGCTCGCG-CCGCTCAGCCGCTCGCG-CCGCTCAGCCGCTCGCGDesign primers
1151832ACGCCGCCCGCGCCC-ACGCCGCCCGCGCCC-ACGCCGCCCGCGCCCDesign primers
1307926GCCGCCTGCGTCCGC-GCCGCCTGCGTCCGC-GCCGCCTGCGTCCGCDesign primers
1352179AGGGCGGCGGTGGGCAGACCGAGC-AGGGCGGCGGTGGGCAGACCGAGC-AGGGCGGCGGTGGGCAGACCGAGC-AGGGCGGCGGTGGGCAGACCGAGC-AGGGCGGCGGTGGGCAGACCGAGCDesign primers
1381797CGCACGCTCCCGCGGCGT-CGCACGCTCCCGCGGCGT-CGCACGCTCCCGCGGCGTDesign primers
1397608GGCTCCGGCCGCCGAGGCCGA-GGCTCCGGCCGCCGAGGCCGA-GGCTCCGGCCGCCGAGGCCGA-GGCTCCGGCCGCCGAGGCCGADesign primers
1838869GGCGGTGGC-GGCGGTGGC-GGCGGTGGCDesign primers
1853356CGCGCCGCCCGCTGT-CGCGCCGCCCGCTGT-CGCGCCGCCCGCTGTDesign primers
2305511CGCCGGCCGCGCCCGTGCAGGCGA-CGCCGGCCGCGCCCGTGCAGGCGA-CGCCGGCCGCGCCCGTGCAGGCGADesign primers
2403357CCTCGCCCG-CCTCGCCCG-CCTCGCCCG-CCTCGCCCGDesign primers
2470324GCGGCTGGCGCGAGCGGG-GCGGCTGGCGCGAGCGGG-GCGGCTGGCGCGAGCGGGDesign primers
2496264GGGCGCGTCC-GGGCGCGTCC-GGGCGCGTCCDesign primers
2550853GCCGCCGGCCCGCCT-GCCGCCGGCCCGCCT-GCCGCCGGCCCGCCT-GCCGCCGGCCCGCCTDesign primers
2550928GCCGCCGGCCCGCCT-GCCGCCGGCCCGCCT-GCCGCCGGCCCGCCT-GCCGCCGGCCCGCCTDesign primers
2597486CGGCGGGCG-CGGCGGGCG-CGGCGGGCGDesign primers
2625811GCGCGCGGCGGCGGT-GCGCGCGGCGGCGGT-GCGCGCGGCGGCGGT-GCGCGCGGCGGCGGT-GCGCGCGGCGGCGGT-GCGCGCGGCGGCGGT-GCGCGCGGCGGCGGTDesign primers
2654435CCGCGTCGCTCGCGCCGG-CCGCGTCGCTCGCGCCGG-CCGCGTCGCTCGCGCCGGDesign primers
2712596GCCGCCCGCCGCCGC-GCCGCCCGCCGCCGC-GCCGCCCGCCGCCGCDesign primers
2857033CGGCGCGGCGGCGGG-CGGCGCGGCGGCGGG-CGGCGCGGCGGCGGGDesign primers
3067898GAGCCGGAGGCTGCCGCT-GAGCCGGAGGCTGCCGCT-GAGCCGGAGGCTGCCGCTDesign primers
3142675CGGTCAAGTAGCCGGCG-CGGTCAAGTAGCCGGCG-CGGTCAAGTAGCCGGCGDesign primers
3248926CGGTCT-CGGTCT-CGGTCT-CGGTCTDesign primers
3523535GCGGCGCGGGCGGGA-GCGGCGCGGGCGGGA-GCGGCGCGGGCGGGA-GCGGCGCGGGCGGGADesign primers
3586914GCGGCCCGTCTCGGA-GCGGCCCGTCTCGGA-GCGGCCCGTCTCGGADesign primers
3675928CCGGCCGCACCGTCTCTG-CCGGCCGCACCGTCTCTG-CCGGCCGCACCGTCTCTGDesign primers
3797007CGGCATCGCCTCGCC-CGGCATCGCCTCGCC-CGGCATCGCCTCGCCDesign primers
4001661CTCCGG-CTCCGG-CTCCGG-CTCCGGDesign primers
4160577CGGCGCAGCCGGCGCGAG-CGGCGCAGCCGGCGCGAG-CGGCGCAGCCGGCGCGAGDesign primers
4184809CGGAGCGGC-CGGAGCGGC-CGGAGCGGC-CGGAGCGGCDesign primers
4516445GCGGGGCGGAGCGGCGGTGCGA-GCGGGGCGGAGCGGCGGTGCGA-GCGGGGCGGAGCGGCGGTGCGADesign primers
4527009GTTCTCGGCTCCTCCGGC-GTTCTCGGCTCCTCCGGC-GTTCTCGGCTCCTCCGGCDesign primers
4547585GCGGGCGGCGGCGCG-GCGGGCGGCGGCGCG-GCGGGCGGCGGCGCGDesign primers
4586154CGCCCCAGCCGCGCCGCC-CGCCCCAGCCGCGCCGCC-CGCCCCAGCCGCGCCGCCDesign primers
4831778CACCCG-CACCCG-CACCCG-CACCCGDesign primers
4870596GACCGGGCCGGGATC-GACCGGGCCGGGATC-GACCGGGCCGGGATC-GACCGGGCCGGGATCDesign primers
4872383CGCATCGCAGCCGCCGCT-CGCATCGCAGCCGCCGCT-CGCATCGCAGCCGCCGCTDesign primers
4993253GGCGGCGGCGCGGCG-GGCGGCGGCGCGGCG-GGCGGCGGCGCGGCG-GGCGGCGGCGCGGCG-GGCGGCGGCGCGGCG-GGCGGCGGCGCGGCGDesign primers
5012848CGGCGCCCCCGCTCCCGT-CGGCGCCCCCGCTCCCGT-CGGCGCCCCCGCTCCCGTDesign primers
5084628TCTGCCGCC-TCTGCCGCC-TCTGCCGCCDesign primers
5270634CGGGAGCGG-CGGGAGCGG-CGGGAGCGGDesign primers
5356676GGCGGCGCAGGC-GGCGGCGCAGGC-GGCGGCGCAGGCDesign primers
5363655GCGGGCGGCGCGGGC-GCGGGCGGCGCGGGC-GCGGGCGGCGCGGGC-GCGGGCGGCGCGGGC-GCGGGCGGCGCGGGCDesign primers
5363731CGGGCGGCGCTGGCG-CGGGCGGCGCTGGCG-CGGGCGGCGCTGGCG-CGGGCGGCGCTGGCGDesign primers
5387173CGCGGGCAGCGCGGT-CGCGGGCAGCGCGGT-CGCGGGCAGCGCGGT-CGCGGGCAGCGCGGT-CGCGGGCAGCGCGGT-CGCGGGCAGCGCGGTDesign primers
5390286CCTTGTCTGCCTTGGTCG-CCTTGTCTGCCTTGGTCG-CCTTGTCTGCCTTGGTCG-CCTTGTCTGCCTTGGTCGDesign primers
5390359CTTGTCTGCCCTGGTCGC-CTTGTCTGCCCTGGTCGC-CTTGTCTGCCCTGGTCGCDesign primers
5390414CTGTCTGCCCTGGTCGCC-CTGTCTGCCCTGGTCGCC-CTGTCTGCCCTGGTCGCC-CTGTCTGCCCTGGTCGCC-CTGTCTGCCCTGGTCGCC-CTGTCTGCCCTGGTCGCCDesign primers
5409799CGCCGGTCT-CGCCGGTCT-CGCCGGTCT-CGCCGGTCTDesign primers
5547722CGCCGCCCGGTCGGGACCATCG-CGCCGCCCGGTCGGGACCATCG-CGCCGCCCGGTCGGGACCATCG-CGCCGCCCGGTCGGGACCATCG-CGCCGCCCGGTCGGGACCATCG-CGCCGCCCGGTCGGGACCATCGDesign primers
5597787ACCGAGCCGCGCGCTC-ACCGAGCCGCGCGCTC-ACCGAGCCGCGCGCTCDesign primers
5677019GGCGTGGTG-GGCGTGGTG-GGCGTGGTG-GGCGTGGTGDesign primers
5762995CCCGC-CCCGC-CCCGC-CCCGC-CCCGCDesign primers
6019324CGGCGATCG-CGGCGATCG-CGGCGATCGDesign primers
6035359CGCCGG-CGCCGG-CGCCGG-CGCCGGDesign primers
6036531CGGCGTCCG-CGGCGTCCG-CGGCGTCCGDesign primers
6085763CGCCTC-CGCCTC-CGCCTC-CGCCTCDesign primers

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