Microsatellites /Tandem Repeats database

Genome: Mycobacterium abscessus subsp. bolletii 50594

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
11188GCCACCGCCGCCACCGCTGCCCCCGCCDesign primers
40160TATATCACTG-CATATCACTG-CATATCGCTGDesign primers
40966CCGACCGGGCCGCCCGGGCCAACCGGGDesign primers
53128CGCGGCAGCGGCTGCGGCAGCGGCDesign primers
125695CGCCCCGCCGCGGCCCGCCGCGTCCDesign primers
150041GTCGGCTGCTGGGTCGTCTGCTGCGTTGGTTGCTGGDesign primers
355814TCCGGGACCGCCAAATCCAGGCCCACCAAAACCGGGCCCGCCAAADesign primers
372029GCCGGGGCCCGGCCCGGGGCCGGGDesign primers
455856ACGATGACGATTTCGATGACGAAGDesign primers
506717GCCAAGAAGGCTCCGGCCAAAAAGGCGCCCGCGAAAAAGGCTGCGDesign primers
555528CGGGCCCTGGCCCGGGGCCGAGCCDesign primers
710428TCGTCGTCGTCATCGGCGTCGGCGDesign primers
818538CCCAGCAGCCCCAGCAGGCGCAGCAGCDesign primers
824802CCCTTACCCCTACCCTTACCCTTTDesign primers
1001999GCGGCTCCGACGGCCTCCGCTCCGACAGCCTCTGCTCCGACGGCCDesign primers
1063890CGTTGGCCTTGGCGTTGAAGTTGGDesign primers
1066985TCGGGCGGCAGATA-GCGGGCGGTAGATA-GCGGGCGGTAGATA-GCGGGCGGTAGATADesign primers
1096079CAGCAGCAGCCGCAGCAGCAGCTGDesign primers
1097728GCGGGATCCGGAACCCGCACCCGAGCCGAATACTGAACCCGCACCCGAGCCGAATACGGAACCCGCACCCGADesign primers
1125539CGTCGATGTCGACGTCGTCGACGADesign primers
1129599TGGACAAGTGGACGAGTGGACGAGDesign primers
1165887TCGGCG-TCGGCG-TCGGAG-TCGGCGDesign primers
1180352ATGACC-AGGACC-AGGACC-ATGACCDesign primers
1452140ACGACGACGAGGACCAAGACGAGGACGACGAGGAGGDesign primers
1588595GAACCCTCGCGAATCCTCGCGAACATTCGCDesign primers
1588628TGGAACAG-GGGAACAG-GGGAACAGDesign primers
1614430AAGCAGCAA-GAGCAGCAA-GAGCAGCAADesign primers
1614458AGCGGC-AGCGGC-AGCAGC-TGCGGCDesign primers
1697585GCGCCGGTTCGCCGGTGCGCCGGTDesign primers
1702021AGCCTTGGGCGGTCTTGGGCGGTCTTGGGCDesign primers
1730657CGATGGCGAGGGTGATGGCGATCGDesign primers
1746652ACGATG-ACGAGG-ACGAGG-ACGAGGDesign primers
1768282CGCCGCGGCGCGCAGCGCCGAGCCGDesign primers
1851023CTTCGCCTGCGCGTTCGCCTTGGCDesign primers
1861178CGACGA-CGACGA-CCACGA-CCACGA-CGACGA-CGACCA-CAACGADesign primers
1909329GACTTCTCGTCC-TTCTTCTCGTCC-TTCTTCTCGTCCDesign primers
1960769CGCAGG-CTCAGG-AGCAGG-AGCAGG-AGCAGGDesign primers
1961139GGTGCGGCTGCGGGTGCGGGTGCGDesign primers
2207729GGCAGCAGCAGCGGCGGCGGCAGADesign primers
2281780GTGGTC-ATGGTC-CTGGTC-CTGGTCDesign primers
2420655CGCCGCCCGCGCCGCCGGCGACGCCCGDesign primers
2480981GTAGTCCTGGTAGTCCTCGTACTCCTGDesign primers
2640633CCTGCGCCAGCGCCTCCGGCTGCGDesign primers
2767642CGACCAGGCCGACCAGGTCGACGAGGCDesign primers
2936448ATCGCCACCGCCATCGCCACCGCCDesign primers
2938572CAGGGGGCCAGGCGGCCGGGGGGCDesign primers
2950787GGGCTTCGACCGGTGGGGCTATGACCGCTGGGGGTACGACCGATGGGGCTATGACCGCTGDesign primers
2979837GGCGTGTCTCGGCATGTCACGGCGTGTCGGDesign primers
3002699AAGGCGCCTGCCAAGAAGGCACCGGCCAAGAAGGCACCCGCGAAGDesign primers
3002753AAGGCGCCCGCGAAGAAGGCACCGGCCAAGAAAGCGCCGGCCAAGAAGGCCGCCGCCAAGDesign primers
3066290CTGTGTTGTATCCCTCGGTTGTATCCCTGGGTTCTATCCDesign primers
3193521ACGACCACCACCACGACGACGACGDesign primers
3213188GGTTCGGGCTCGGGTTCAGGTTCGDesign primers
3213252CCGCCTCCGCCGTCTCCGCCGGCTCCGDesign primers
3267383CGGCCCTTCTTGGCCGGAGCCTTCTTGGCCGGGGCCTTCTTGGCCDesign primers
3267511AGCAGCCTTCTTGACGACTGCCTTCTTGACCGGAGCCTTCTTGGCDesign primers
3267559CGCGGCCTTCTTGACGACTGCCTTCTTGACCGGAGCCTTCTTGGCDesign primers
3294624AGGGCGCGCGATGGCGCGCCATGGCGTGCGDesign primers
3324505CAAGGACAAAGACAAGGACAAAGADesign primers
3334990GCGGCGGTGGCGGCGGCAGCGGCCDesign primers
3368798CCGCGCACCGCGCCGCGAGCA-CCGCACGCCGCACCGCGAGTA-CCGCACGCCGCACCGCGAGTA-CCGCACGCCGCACCGCGAGCADesign primers
3375507GCCGTATGCCGCCGTTCGCCGCCACATGCCDesign primers
3382367GGGCCCCGGGGCGCCGGGGCCGCGDesign primers
3464867CCCGGAACCTGACCCGGAACCGGAGCCGGAGCCTGADesign primers
3475097CGG-AGG-CGG-CGG-TGG-CGG-CGG-AGG-TGGDesign primers
3482335CCTGCTGTTGGGCCTGCTGTGGCGACTGCTGTTGCGDesign primers
3572311CGGCCGCACCGGCCGCGCCGGCCGCACDesign primers
3687976GCAGGTCATGCAACAGGTCATGCAGCAGGGCCTGCADesign primers
3688548GCGGTGCCGGTGGCGGTAGCGGTTDesign primers
3693097GCCGAAGACGACGACACCGAGGACGAGGACACCGCGGACGACGACDesign primers
3741473TCGCGA-TCGCCA-TCGCCA-TCGCCADesign primers
4069911CGGGCACCCGGGGGCGCCCGATGGCACCCGDesign primers
4089553CGCAGCCTTCTTGGCGGGGGCCTTCTTGGCCGGGGCCTTCTTGGCDesign primers
4189686CGG-CGG-AGG-GGG-CGG-AGG-CGG-CGG-GGGDesign primers
4203994CGGCTG-CCGATG-CCGATG-CCGATG-CCGATG-CCGATGDesign primers
4333366ATCCCGCAGATTCCGCAGATCCCGCAADesign primers
4341104GCAGCGTTACCCGCCAAC-CCAGCGTTACCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCGTTACCCGCCAAC-CCAGCGTTACCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCGTTACCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCATTGCCCGCCAAC-CCAGCGTTACCCGCCAACDesign primers
4422395GGCCGGGTTGTCCGGGTTGTCCGGGTTDesign primers
4504583GATGCCGCCGATGGCGCCGATGGCGCCDesign primers
4777416CACCGCCACGGCCACCGCCACCGCDesign primers
4941371AGCAGCGGCAGCAACAGCAGCACCDesign primers

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