Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Xanthomonas citri subsp. citri Aw12879

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
11192	CCC-GCC-GCC-GCC-GCC-GCC-GCC-GCC	Design primers
19421	CGATTCCCCATTCCCGATTCCCTATTCC	Design primers
123620	CTCGTGA-CGCACAA-CGCACAA-CGCACAA-CGCACAA-CGCACAA-CGCACAA-CGCACAA-CGCACAA	Design primers
150207	CGGGAAT-CGGGAAT-CGGGAGT-GGGGAAT-CGGGAAT	Design primers
171943	GCCGCA-TCCGCA-TCCGCA-TCCGCA	Design primers
173692	CAACAGCCACAGCTACAGCCACAGCCACAG	Design primers
209708	GCACGAGCGCGAGCCCGAGCCCGA	Design primers
232808	ACCGGC-ACTGGC-ACTGGC-ACTGGC	Design primers
246725	CGAATCC-CCAATCC-CCAATCC-CCAATCC	Design primers
296154	CCGATTCCCTATTCCCGACTCCCCATTC	Design primers
308741	TGGTGA-TGACCA-TGACCA-TGACCA-TGACCA-TGACCA-TGACCA-TGACCA-TGACCA	Design primers
316273	ACGCTGCACCATCGCC-ACAACGCACCATCGCC-ACAACGCACCATCGCC-ACAACGCACCATCGCC-ACAACGCACCATCGCC-ACAACGCACCATCGCC-ACAACGCACCATCGCC	Design primers
356452	TGGCTGTGGGTGTGGCAGTGGCCG	Design primers
392281	GGCAGCCAAGAAGGCAGCAGCCAAGCCGGCGGCAGCGAAGAAGAC	Design primers
392610	GCCATGTGCCATGAACCATGTGCAATGT	Design primers
411903	ACGGCCAAGGCCAGGGCCAGGGCC	Design primers
412840	CGCACC-GGCACC-GGCACC-GGCACC-GGCACC	Design primers
448117	ATTCCCCATTCCCATTTCCCCATTCCCG	Design primers
546507	GGACCTGCCGGACCTGCTGCACCTGCC	Design primers
556955	ATTGCA-TCTACA-TCTACA-TCTACA-TCTACA-TCTACA-TCTACA-TCTACA-TCTACA	Design primers
566257	GCGCCA-ACGCCA-ACGCCA-ACGCCA	Design primers
567057	CATTGGCA-CGCAGGCA-CGCAGGCA-CGCAGGCA-CGCAGGCA-CGCAGGCA-CGCAGGCA-CGCAGGCA	Design primers
622104	GGCAATC-GGGAATC-GGGAATC-GGGAATC	Design primers
703304	TCTTGCG-CTTCCCG-CTTCCCG-CTTCCCG-CTTCCCG-CTTCCCG-CTTCCCG-CTTCCCG-CTTCCCG	Design primers
740187	AAACCCAAGCCCAAGCCCAAACAC	Design primers
754606	ACACG-CCACG-CCACG-CCACG-CCACG	Design primers
755687	CGCCGGCGGGAGAGGGGCTCAAGCGCGTGGGCGGGAGAGGGGCTCGAGTGCGTGGACGGGAGAGGGGCTCGAGTGCGCGGGCGGGAGAGGCGCTCGAGCG	Design primers
755960	CACACCCACACTCGCACCCACACC	Design primers
791799	CCACAC-CGACAC-CGACAC-CGACAC	Design primers
848919	CCGATTCCCCATTCCCAATTCCCCATTC	Design primers
859003	ACAACAGCGACGACAGCGACGACAGCG	Design primers
999364	CCAATCC-CGAATCC-CGAATCC-CGAATCC	Design primers
1026764	GGAAGCGCGCGGCAAGGGCGCGGCAAGGGCGCG	Design primers
1028151	GAGAATC-GGGAATC-GGGAATC-GGGAATC	Design primers
1054506	CGCGAGC-GGCGAGC-GGCGAGC-GGCGAGC	Design primers
1063871	CCGGCGCCGCCGCGGGCGCAGGCG	Design primers
1078475	ATCGAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC-ACCAAC	Design primers
1078625	ACGCA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA	Design primers
1089420	GTCGGCGTAGGCGCCGGCGTTGGC	Design primers
1093538	CGGGAATCGGGAGTTGGGAATCGGGAAT	Design primers
1095274	GGTGGCATGGGCGGCATGGGCGGCATG	Design primers
1103148	CCGATTC-CCAATTC-CCAATTC-CCAATTC-CCAATTC	Design primers
1253791	GGGAATCGGAACAGCTTG-GTGACCCGGAACAGCTTG-GGGACCCGGAACAGCTTG-GGGACCCGGAACAGCTTG	Design primers
1277202	TGTGCCGGGAAA-ATTGCCGGGAAA-ATTGCCGGGAAA	Design primers
1441347	TCACTTCATTTCACTTCACTTCACG	Design primers
1471738	GGTGGTGGAGGGGGTGGAGGGGGTGGAGGTGGCGGA	Design primers
1471786	GGAGGTGGAGGTGGTGGAGGTGGTGGAGGTGGTGGA	Design primers
1476412	CGAATCC-CAAATCC-CAAATCC-CAAATCC-CGAATCC	Design primers
1511651	CGGGTCGCCCGGCTCGCCCGGGTTGCC	Design primers
1556076	CGGCACCCGCACCGGCAACGGCAC	Design primers
1557699	CATCGA-CATCGA-CATGGA-CAACGA	Design primers
1569285	CCGATTC-CCGAATC-CCGAATC-CCGATTC	Design primers
1580207	GGGAATGGAGAATGGGGAGTGGGGAATG	Design primers
1580335	CGATTCC-CTATTCC-CCATTCC-CCATTCC-CCATTCC	Design primers
1625097	GCCAATCCGCCAATCTGCCATTCCGCCATTCC	Design primers
1761294	GCCGCCACCGCCACCGCCGCCGCA	Design primers
1781995	CGCCGGTGGCGCCGGTGACGCCGGCGG	Design primers
1867325	AGCCGGCGA-AGCCGGCGA-AGCCAGCGA	Design primers
1899886	CACGCGCTCTCGCGCGCTGTCACGGGCGCT	Design primers
1942265	TCGATCTCGTTCTTGATCTTGATC	Design primers
1963826	GTTGCCACGTTGCGACGTTGCCAG	Design primers
2045619	CGGGAATAGGGAATCGGGATTGGGGAAT	Design primers
2048585	TTGGGAA-TCGGGAA-GCGGGAA-GCGGGAA-GCGGGAA-TCGGGAA-TCGGGAA-GCGGGAA-GCGGGAA-GCGGGAA-GCGGGAA-GCGGGAA	Design primers
2053037	CGATTCCCGATTCTCCATTCCCGATTCC	Design primers
2072940	GGGCGCGACCGCGCGCGACTGGCCTCGACC	Design primers
2092708	GCTTCTTGCTTCTAGGTTCTTGCTTCTC	Design primers
2093298	AGCGCA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA-GCGACA	Design primers
2103823	CTGCCTGGCTGCCGGGCTGGCTGG	Design primers
2113447	TTTGTGG-GATTCGG-GATTCGG-GATTCGG-GATTCGG-GATTCGG-GATTCGG-GATTCGG-GATTCGG-GATTCGG-GATTCGG-GATTCGG	Design primers
2113557	GGGATAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA	Design primers
2121732	TGGGGAA-TCGGGAA-TCGGGAA-TCGGGAA	Design primers
2136442	GCACGGGACGGGACGGCCCGGCACC	Design primers
2138149	GCCCGCGACCGAGCACTCGACCGAGCCCGCGCCCGT	Design primers
2140308	GCCCCAGATGCCCCGGATGCCCCGGAT	Design primers
2215826	TGCAGCGGCTCG-GTCAGCGGCTCG-GTCAGCGGCTCG	Design primers
2234121	GGCCTTCTTCGCAGGCGCCTTTTTCGCGGGTGCCTTCTTGGCAGC	Design primers
2265030	GGGAATCGGGAATGGTGAATCGGGAATG	Design primers
2265078	ATTCCCGATTCCCCACTCCCGATTCCCG	Design primers
2322981	CCATCGATCCGTCGATTCATCGATTCATCGAT	Design primers
2412479	CCTCCACCACCACCTCCTCCTCCC	Design primers
2423749	GGGAATGGGGAGTGGGGAGTGGGGAATCGGGAATG	Design primers
2423831	CGATTCCCCATTCCCGAGTCCCGATTCC	Design primers
2513071	CTGCCG-GTGCCG-GTGCCG-GTGCCG-GTGCCG	Design primers
2531483	GAATCGGGAATGGGGAATGGGGAATCGC	Design primers
2615266	CTCGCGCAGGCGCTCGACCAGGCGGTCGCGCACGCG	Design primers
2729687	GCGCGTGCGCCTGGGCGTGCGCGC	Design primers
2732505	CCGGCACCGGTAACGGCACCGGCG	Design primers
2751165	TGGGGAA-TCGGGAA-TCGGGAA-TCGGGAA	Design primers
2868184	GGGAATC-GGGATTC-GGGATTC-GGGATTC	Design primers
2875142	GTGCTGGCGCGCTGGCGTGCCGGC	Design primers
2880621	TCGCCCAGCGCTTCACGCAGCGCTTGGCCCAGCGCA	Design primers
2936105	ACACGCTCTAGGCCGATGCGACGGTCTAGGCCGATGCGACGGTCTAGGCCGATG	Design primers
2938059	CG-CG-CG-TG-CG-AG-CG-TG-CG-AG-CG-TG	Design primers
3005468	TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG-TGCTGG	Design primers
3054765	GCTCGCGCGCGCGTTCGCGCTCGT	Design primers
3080965	TTGGGGA-ATCGGGA-ATCGGGA-ATCGGGA-ATCGGGA-ATCGGGA	Design primers
3083712	GCCACTGCCCCTGCCGCTGCCACTGCCACT	Design primers
3088601	GAGGCTTTGGAGGCGTTGGATGCTTTG	Design primers
3093448	CGAATCCCTAATCCCGAATCTCCAATCC	Design primers
3125803	CGATTCCCCATTCCCTATTCCCCATTCC	Design primers
3127280	AAGTCGG-GAATCGG-GAATCGG-GAATCGG-GAGTGGG-GAATCGG	Design primers
3127414	CCCATTCCCGATTCCCCACTCCCGATTC	Design primers
3140246	CGCCGAAAATATTGCCGAAGATATCGCCAAAGATAT	Design primers
3175382	CAGGCGATG-GAGGCGATG-GAGGCGATG	Design primers
3184326	CAC-CAC-CAG-CAC-CAC-CAG-CAG-CAC	Design primers
3196703	GCGAAT-GCCGAT-GCCGAT-GCCGAT-GCCGAT-GCCGAT	Design primers
3212081	GCTGGCGCTGGAACTGGCGCTGGC	Design primers
3213762	CCTCATT-CCCGATT-CCCAATT-CCCGATT-CCCGATT-CCCGATT	Design primers
3248172	CGCTGTTGCAGCGGTTGCAGCGGTTGCAGCGGTTGCAGCGGTTGCAGCGGTGGC	Design primers
3259732	GCGATTC-CCGATTC-CCGATTC-CCGATTC	Design primers
3274647	ATTCCCGATTCCCCACTCCCGATTCCCG	Design primers
3275938	CGATTCC-CCATTCC-CCATTCC-CGATTCC	Design primers
3280521	GATTCCCGATTCTCCATTCCCGATTCCG	Design primers
3287443	CGATTCCCGACTCCCGATTCCCGACTCC	Design primers
3303776	GAGTGACG-CAGTGACG-CAGTGACG-CAGTGACG	Design primers
3303887	TCCCGATTCCCGACTCCCTATTCCCGAC	Design primers
3307909	CCGTCAGC-ACGTCAGC-ACGTCAGC-ACGTCAGC	Design primers
3342439	ACCGCCCCCGCCACCGCCGCCGCC	Design primers
3346737	TCGCGC-CCGCGC-CCGCGC-CCGCGC	Design primers
3362635	TGGGAAT-CGGGAAT-CGGGAAT-CGGGAAT-CGGGAAT	Design primers
3366251	CCGGGAC-CCGGGAC-CCGGGTC-CCGGGTC	Design primers
3368177	CCACCACCGCCAGCACCACCACGA	Design primers
3369140	ACGATTCCCGATTCCCGATTCACCATTC	Design primers
3371047	CGGGAATTGGGAATCGGGAGTGGGGAAT	Design primers
3395069	CACCGCACCCCACGGCGCCGGACCG	Design primers
3406512	CTGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA	Design primers
3420823	CTTCTCC-GATTCCC-GATTCCC-GATTCCC-GATTCCC-GATTCCC-GATTCCC-GATTCCC-GATTCCC	Design primers
3438073	GGCGGCGCCG-CGTGGCGCCG-CGTGGCGCCG-CGTGGCGCCG	Design primers
3456364	TTTGCGG-AATCGGG-AATCGGG-AATCGGG-AATCGGG-AATCGGG-AATCGGG-AATCGGG-AATCGGG	Design primers
3456428	TTCGGGA-TTCGGGA-TTCGGGA-TTCGGGC	Design primers
3472207	ATTCCCGATTCCCTACTCCCGATTCCCA	Design primers
3488893	TTCTTGGCGTCG-GCCTTGGCGTCG-GCCTTGGCGTCG	Design primers
3495224	GAGCAGCGT-CAGCAGCGT-CAGCAGCGT	Design primers
3576066	CGATTCCCCATTCCCGATTCGCTATTCC	Design primers
3589377	CCCCATTCCGCATTCCCCATTCCCGATT	Design primers
3600790	TTATTG-CCATTG-CCATTG-CCATTG-CCATTG-CCATTG	Design primers
3600889	CTGGTG-CGGGTG-CGGGTG-CGGGTG	Design primers
3667472	CTCCTGCCAC-TGCCTGCCAC-TGCCTGCCAC-TGCCTGCCAC-TGCCTGCCAC	Design primers
3672221	TGCTGCTGCTCCTGCTGCTGCAGC	Design primers
3672298	CTGCACCTGCTGCTCCTGCTGCACCTG	Design primers
3726227	GGCGTGCTGTCGTGCTGTCGTGCT	Design primers
3726629	GGCAGGCTTCTTGGTAGCGGTCTTCTTGGTGGCGGACTTCTTGGT	Design primers
3732327	ACGCGACGTAAGCGACGTAAGCGACGT	Design primers
3753183	CAGCGGCAGCGTCACCGGTAGCGG	Design primers
3804401	GCTCTTC-GGGAATC-GGGAATC-GGGAATC-GGGAATC-GGGAATC-GGGAATC-GGGAATC-GGGAATC	Design primers
3841904	GGGATTG-GGGATTG-GGGAATG-GGGATTC	Design primers
3846077	GATTCCC-GATTCCC-GATTGCC-GATTCCC-GATTCTC	Design primers
3846729	TCGATTCCCGATTCTCCATTCCCGATTC	Design primers
3851468	GGCGGCGGCAGCGGCCGCGGCGAC	Design primers
3893606	GCGCGCCT-GCGCGCCT-GCGCGCGT	Design primers
3950135	GCCACGG-GCAACGG-GCAACGG-GCAACGG	Design primers
3970911	CGGGAAT-CGGGAAT-CGGGAAT-CGGGAAT-CGGGAAT-CGGGAAT	Design primers
3974938	GCCGTAGCGGTAGCCGTGGCCATA	Design primers
4084640	GCCAGC-GCCAGC-ACCAGC-GCCACC	Design primers
4100712	CTGGTGCTGGCGCTGCTGCAGGTG	Design primers
4103090	CGGAAAT-CGGAAAT-CGGAAAT-CGGAAAA	Design primers
4154747	CGCCCATTGCAGGCCCATTGCCTGCCCATCGCA	Design primers
4158189	CGCTGC-AGATGC-AGATGC-AGATGC-AGATGC-AGATGC	Design primers
4217112	CATCGC-CGTCGC-CGTCGC-CGTCGC	Design primers
4238601	CGGCGCCGGTGCCGGTGCCGCCGC	Design primers
4238971	GAATGGGGAATCGGGAATGGGGAATCGG	Design primers
4241382	ATTCCCG-ATTCACG-ATTCACG-ATTCCCG	Design primers
4254473	CCCATTCCCGATTCCCCATTCCCCAATC	Design primers
4279066	ACGGGAATCGGGAAAAGGGAATCGGGAA	Design primers
4297179	AAC-GGC-GGT-GGC-GGT-GGC-GGT-GGC-GGT-GGC-GGT-GGC-GGT-GGC-GGT-GGC-GGT-GGC	Design primers
4297234	GTG-GCG-GCG-GCG-GCG-GCG-GCG-GCG-GCG-GCG-GCG-GCG	Design primers
4297624	CCG-GCG-GTG-GCG-GTG-GCG-GTG-GCG-GTG-GCG-GTG-GCG	Design primers
4300379	CGG-CGG-TGG-CGG-TGG-CGG-TGG-CGG-TGG-CGG	Design primers
4314439	CCGGCACCGGTACCGGCGCCAGCA	Design primers
4352307	TGCGCTGTTGGCTGTTGGCTGTTGGCTGTTGGCCGTTGGCCGTTGGCTGTTGGCTGTTGGCTGTTGGCTGTTGGCCGTTGGCCGTTGGCCGTTGGCCGTTGGCTGTTGGCTGTTGGCCGTTGGCCG	Design primers
4352434	TGGCCGT-TGGCCGT-TGGCCGT-TGGCCGT-TGGCTGT-TGGCCGT-TGGCCGT-TGGCCGT-TGGCCGT-TGGCCGT-TGGCCGT-TGGCTGT-TGGCTGT-TGGCTGT-TGGCCGT-TGGCTGT-TGGCTGT-TGGCCGT-TGGCCGT-TGGCCGT-TGGCCGT	Design primers
4381340	GCGAATC-GGGAATC-GGGAATC-GGGAATC	Design primers
4391349	ACGGGAA-TCGGGAA-TCGGGAA-TCGGGAA	Design primers
4391750	CCGCGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT-TGCTGT	Design primers
4391914	CCATTCC-CAATTCC-CAATTCC-CGATTCC-CCATTCC	Design primers
4397416	GAATGGGGAATCGGGAATCGGGAATCGGGAATGGA	Design primers
4397475	CGATTCCCCATTCCCGATTCCCCATTCC	Design primers
4404599	TGCGGT-GGCAGT-GGCAGT-GGCAGT-GGCAGT-GGCAGT	Design primers
4406438	CGCGGCGGCGGGTGCAGCGGCGGGCGCAGCGGCAGG	Design primers
4441488	CGATGCGTG-CGATGCGTG-CGATGCGGG	Design primers
4446081	CCGACGCCAACGCCGACCCCCACGCCGACG	Design primers
4464590	GCGATAGCC-GCGATAGCC-GCGATGGCC	Design primers
4473260	GGCATAGGCATAGTCATCGGCATAGTCATCGGCATAGGCATCGGCATC	Design primers
4503137	CACCACCAGCACCAGCACCACCGC	Design primers
4507373	CCGGGAA-TCGGGAA-TCGGGAA-TCGGGAA	Design primers
4510500	CGATTCCCCATTCCCGATTCTCGATTCT	Design primers
4551954	CGGTAT-CGGCAT-CGGCAT-CGGCAT-CGGCAT	Design primers
4567916	CGCCAGCGCCGGCGCCACCACCAG	Design primers
4578660	GGGATTCGGGAATCGGGATTGGGGAATC	Design primers
4578772	GCGGGGGGGATCGCTGGCGGGATCGCTGGCGGGATC	Design primers
4589007	CGATTCCCCATTCCCGATTGCCTATTCC	Design primers
4626031	TGGGAAT-CGGGAAT-CGGGAAT-CGGGAAT-CGGGAAT	Design primers
4626131	CGATTCCCCATTCCCGATTCCCAATTCC	Design primers
4663846	CCGGCTGCTG-CCGGCTGCTG-TCGGCAGCTG	Design primers
4665888	CCGCCGCAGCCGCCGCCATCGCCG	Design primers
4689518	CGGCA-TCGCA-TCGCA-TCGCA-TCGCA-TCGCA	Design primers
4695915	CGACG-TGACG-CGACG-CGACA-CCACG	Design primers
4705325	CGGGAATGGGGAATCGGGAGTGGGGAAT	Design primers
4707500	GAGGCCG-GGAATCG-GGAATCG-GGAATCG-GGAATCG-GGAATCG-GGAATCG-GGAATCG-GGAATCG	Design primers
4773378	TGGGGAA-TCGGGAA-TCGGGAA-TCGGGAA	Design primers
4792029	CCATTCC-CGATTCC-CGATTCC-CGATTCC	Design primers
4792704	CGATTCCCGACTCCCGATTCCCGATTCC	Design primers
4797098	GCGCCATCGCGCCAACGCGCCAGC	Design primers
4800370	CCACCACCACCGGCACCACCAGCA	Design primers
4803080	GAATCGGGAATGGGGAATGGGGAATCGA	Design primers
4803155	TTACCCA-TTCCCTA-TTCCCTA-TTCCCTA-TTCCCTA-TTCCCTA	Design primers
4913621	GGGAATC-GGGAATC-GGGATTC-GGGAATG	Design primers
4913715	CGATTCCCAATTCCCGATTCCCGATTCC	Design primers
4915209	TCGGGAATAGGGAAACGGGAATCGGGAA	Design primers
4916235	ATTCCCTATTCTCTATTCCCGATTCCCG	Design primers
4926372	GGCGGCAGCGGCGCCGGCGTCGGC	Design primers
4932259	CAGCACCTGCACCAGCACCAGCAA	Design primers
4953108	TGAGCGG-GGATTCG-GGATTCG-GGATTCG-GGATTCG-GGATTCG-GGATTCG-GGATTCG-GGATTCG-GGATTCG-GGATTCG-GGATTCG	Design primers
4953198	GGGATTG-GCGGTTG-GCGGTTG-GCGGTTG-GCGGTTG-GCGGTTG	Design primers
4957205	GCCGCGGCTGCGGCTGCGGCCCCG	Design primers
5010520	CTTGTCGTGCTGCGCTTGGTCGTGCTGCGCTTGGTCGTGCTGCTC	Design primers
5023465	GACCGG-CACCGG-CACCGG-CACCGG	Design primers
5035204	TGTCGTGCGCAGTGTCGCGCGCGGTGTCGTGCACAC	Design primers
5052799	GGCGGAGATGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGTGGCGGCGGCGGTGGTGGC	Design primers
5080013	TCG-ACG-ACG-GCG-ACG-GCG-ACG-GCG-ACG-GCG-ACG-GCG	Design primers
5104791	CCAATCCCGAATCCCCAATCCCCAATCC	Design primers
5116947	TTGCTGA-TGGCTGA-TGGCTGA-TGGCTGA	Design primers
5128168	TCGGTC-TTGAAG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTG	Design primers
5138108	GCCAGA-ACCAGA-ACCAGA-ACCAGA	Design primers
5138166	CGGTCA-GGGTCA-GGGTCA-GGGTCA	Design primers
5139905	CGGCT-CGGCT-GGGCT-GGGCT-GGGCT	Design primers
5167294	TTCCCGAATCCCGAATCCCGATTCCCGATTCCCGATTCCCGG	Design primers
5189945	GGGAATCGGGAGTCGGGAATAGGGAATT	Design primers
5190044	ATTCCCGATTCCCCACTCCCGATTCCTG	Design primers
5226261	TGGGATT-GGGGATT-GGGGATT-GGGGATT	Design primers
5231530	GCTTTG-CTGTTG-CTGTTG-CTGTTG-CTGTTG-CTGTTG-CTGTTG-CTGTTG-CTGTTG	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

11192

CCC-GCC-GCC-GCC-GCC-GCC-GCC-GCC