Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Pandoraea pnomenusa 3kgm

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
33386	CGATGGAATG-CGACGGAATG-CGACGTAATG-CGACGGAATG	Design primers
39968	CGGCACATCG-CTGCATATCG-CTGCATATCG-CGGCATATCG-CGGCATATCG	Design primers
44130	CGGCGGCGGGGGCGGCGCCGGCCG	Design primers
48857	GCGCGGTCAGTGCGGTCAGTGCGGTCA	Design primers
93360	GGACGCGATCGGGAGCGATCGGAGGCGATT	Design primers
115497	CAAGGGTG-CAAGGGTG-CAAGGTTG	Design primers
119274	GCGGCAGGGGCAGCAGGGGCGGCAGGGGCGGCAGGG	Design primers
182153	GCGCCTCAACGCCTCAGCGCGTCA	Design primers
204910	GCCCGCGGCCGCGGCCGCGCCCGT	Design primers
235363	TGCTGATATCCCTGCTGATAGCCTTGCTGGTAACCCTGCTGGTAGCCC	Design primers
246016	GCCGTCAGCC-GCCGTCAGCC-GCCCTCATCC	Design primers
252092	CTCGGGCTCGGTCCGGCTCGGTCGGGCTCGGTCGGGCTCA	Design primers
253129	GTGGAACGGTCGAACGGTCGAACG	Design primers
260038	TGG-TGC-TGT-TGC-TGC-TGC-TGG-TGC	Design primers
267191	AGAGGTCGA-GGAGGTCGA-GGAGGTCGA	Design primers
281080	GCGGCTGG-GCGGCTGG-GCGGCTCG	Design primers
283909	GCGGGTGCTTTTGCGGGCGCTCTTGCGGGCGCTTTT	Design primers
296843	GGGGGGCA-CGGGGGCA-CGGGGGCA	Design primers
358574	GAGGCCGGTGTGGCCGGTGTGGCCGGT	Design primers
364980	CCGCCACAGCCACCGCCTCCGCCT	Design primers
459317	GCCGCCGCGAAGAAGCCGGCAGCGAAGAAGGTTGCCGCCAAGAAG	Design primers
459581	AAGAAGCCGGCGGCCAAGAAGGTTGCGGCCAAGAAGCCCGCTGCGAAGAAGGCGGCTGCC	Design primers
472374	GCCGATGGTGACGATGGTGCCGACGGTGCCGATGGCGCCGACGGT	Design primers
477937	ACCCGGAAGCCCGGAAACCGGGAA	Design primers
553353	GGCCCGAAGAAGCGGCCGAAGAAGCGCCCGATGAAG	Design primers
554785	GCGCGGCGTGAGCG-GCGCGGCGTGAGCG-GCGCGGCGTCGGCG	Design primers
588663	CCGACACGTCTGACACGTCTGATACGTCTGATACGTCTGATACGTCTGATACGT	Design primers
594622	CTTTCTCGC-CTTTCTCGC-CCTTCTCGC-CTTTCTCGG	Design primers
606661	GGTGCTTCAGGCGGGCTTCAGGCGGGCTTCAGG	Design primers
608037	ATTCGACGCATCCGACGCATCCGACGC	Design primers
649000	CGGACGAATCCGACGAATCCGACGAAT	Design primers
659316	GACGGCGGGACATTGACGGCGGGACATCGACGGCAAGACATTGACGGCAGGACATC	Design primers
659529	GCACGAAACGGTGCGAAACGGCGCGAAACG	Design primers
674057	CGCGGCGCTGCGCGACCCGGCGCAG	Design primers
685803	CGCGGATGC-GGCGGATGC-GGCGGATGC	Design primers
685926	GAGCCGTAC-GAGCCGTAC-GAGCGGTAC-GAGCGGTAC	Design primers
688727	CCGATTGGGCGGATTGGGACGATTGGG	Design primers
698053	GGGGAAGGGGGGGAGGGGGGGAGGGGGGAAAG	Design primers
706064	CGACCGTTAACGTCCGTGAACGTCCGTGAA	Design primers
713612	ACGTGAGGTGCGTGAGGTATGTGAGGT	Design primers
726363	ACGCCTGAG-CCGCCCGAT-CCGCCCGAT-CCGCCCGAT-CCGCCCGAT-CCGCCCGAT	Design primers
727314	TTTTCG-TTGTCG-TTGTCG-TTGTCG-TTGTCG	Design primers
733254	GTGCCACGACCC-TCGCCACGACCC-TCGCCACGACCC-TCGCCACGACCC	Design primers
755939	GAAGGACGTGAAGGATGTGAAGGACGG	Design primers
763774	GAGATGCCGTCGGATATGCCGTCGGATACGCCGTCG	Design primers
790106	CGGACGGGAAAGGCGGGAAAGGCGGGAAAGGCGGGAAAGGCGGGAAAGGCGGGAAGGACGGGAAGGACGGGA	Design primers
809752	CCGCGAGGGACGCGAGGGACGCGAGGGCCGCGAGCG	Design primers
820766	GCCGGCATCCACCGGCGTCCGCGGGTATCCGCCAGCATCG	Design primers
824795	GTGTCGGTC-GTGTCGGTC-GTTTCGGTC	Design primers
834957	GCCGCGGCCGTGGCCGCAGGCGCG	Design primers
837734	TGCCGCCGATGCCGCTGATGCCGCCGATGCCGCCGC	Design primers
846428	CACCAACATCACGAACATCAACAACAT	Design primers
847596	TCCCAACCTCAACCCGAACCTCAACCCCAACCTCAG	Design primers
875821	CGTGTTTCACACCGTGTTTCGCATCCTGTTTCGCAC	Design primers
883488	GATGGGCACGATAGGCACGATGGGCAC	Design primers
891318	GCGGGAACGGA-GCGAGAAGGAA-GCGAGAAGGAA-GCGGGAAGGAA-GCGAGAAGGAA-GCGAGAAGGAA-GCGGGAAGGAA-GCGGGAAGGAA-GCGGGAAGGAA-GCGGGAAGGAA	Design primers
899146	ATCGCACGCCC-ATCACCCGCCC-ATCACCCGCCC-ATCACCCGCCC	Design primers
969945	GACGATAAG-GACGCAAAG-GGCGCAAAG-GACGCAAAG-GACGCAAAG-GACGCAAAG	Design primers
978769	CGCCCCGCGCGCCCCGGGCGCCCCGGG	Design primers
995387	ACGGTGGACACGGAGGACACGATGGAC	Design primers
997906	GCGCTGGCGCAGGCGCTGGCGCTG	Design primers
1014608	CGATCGGGCCGATCAGGCCGATCCGGC	Design primers
1046288	GCCGATAG-TCCGATAG-TCCGATAG	Design primers
1067703	AGCCGATAAAGCTGATAACGCCGATAA	Design primers
1068239	TCGTTCGATTTGTTCGATTTGTTCGAT	Design primers
1170041	GGGGGA-GGGGGA-GGGAGA-GGGGGA	Design primers
1172015	GTTCCTGATTCGTTCTCGATTCGTTCCCGATTT	Design primers
1181895	CTCGTCGCCAGTCGTTGCCAGTCGTCGCCA	Design primers
1202033	GCCGGTGCAGGTGCCGGCGCCGAT	Design primers
1207929	ACCGCTCA-CCAGCTCA-CCAGTTCA-CCAGCTCA-CCAGCTCA-CCAGCTCA	Design primers
1209513	TCGGAGAGT-CGGGGGAGT-CGGGGGAGT-CGGGGGAGT-CGGGGGAGT-CGGGGGAGT	Design primers
1228127	GCTCTCAACCGCGCCCTCAACGGCGCCCTCAACAGC	Design primers
1246614	CCC-GGC-GGC-CAC-GGC-GGC-CGC-GGC-GGC	Design primers
1249284	TTTGCCTCG-TTTGCCCCG-TTTGCACCG-TTTGCACCG-TTTGCACCG-TTTGCACCG	Design primers
1250543	TGAAACGGA-TGAAACGGA-CGAAACGGA	Design primers
1253813	GGCGCTGGCGGCGCGGGCGGCGCGGGC	Design primers
1263259	TGCGACGTTCGGCGACTTTCTGCGACTCTC	Design primers
1271118	GACATGGGCGGCATGGGCGGCATGGGC	Design primers
1281504	GAAATCGGACGATATCGGGCGATATCGGAC	Design primers
1298500	CCGACGCCTC-TCCACGCCTC-TCCACGCCTC-TCCACGCCTC	Design primers
1298541	CCACGCTTAT-CCACGCTTAT-CCACGCTTAT	Design primers
1326815	GCGCG-GCGCG-CCGCG-GCGCG-GCGCC	Design primers
1336064	TGCGACTT-CGCGACTT-CGCGACTT	Design primers
1340420	TCCTTGCGCATCCCTGGGCATCCCCGCGCA	Design primers
1348327	ACAGGGCACGGCAAGGCACGACGGGACACGACAGGACACGACAGGACACG	Design primers
1366721	GCGAGGGTGGGCTAGGGTGGGCGAGGACGG	Design primers
1394953	GTCGGAAAAC-GACGAGAAAC-GAAGAGAAAC-GACGAGAAAC-GACGAGAAAC-GACGAGAAAC	Design primers
1401993	GCTTGATGTCC-GCGCGATGTCC-GCGCGATGTCC-GCGTGATGTCC-GCGTGATGTCC	Design primers
1404802	TATCCCGCATATGCCGCATATGCCGCATATCCCGAATATCCCGCG	Design primers
1408155	CGAGCGCGGACGATGGCGGACGAGGGCGAA	Design primers
1408228	CGCCATG-CGTCATG-CGTCATG-CGTCATG	Design primers
1409111	CGGCGTCGATCCTGGCGTCGATCCTGGCGTCAATCCCGGCATCAATCCCGGCATCAATCCCGGCGTCAATCG	Design primers
1428986	GTGGCGGGCGTGGTGGGCGTGGTGGGC	Design primers
1459264	GCGCGCTATCGGCCTGCTATCGGCCTGCTATCG	Design primers
1486228	GGAATAGCAGCGGGAATAACCGCGGGAGTAGCAGCG	Design primers
1495872	CGGTCGTCCCGGTCATTCCGGTCATTCCGGTCGTTCCGGTCGTTCCGGGCGTTCCGGTCGTTCCGGTCGTTC	Design primers
1527385	ATGGCGCGAAAATGAAGCGAAAATGAAGCGAAA	Design primers
1532693	GCACTGAGCG-GCACTGAGCG-GCACCAAGCG-GCACCAAGCG	Design primers
1546540	GCCGCTGCGTCCGCTGCGGCCGCTTCG	Design primers
1560614	AACGGTACGAATGGTACGAATGGTACG	Design primers
1562822	GCGTCGGGC-ACGTCGGGC-GCGTCGGGC-GCGTCGGGC	Design primers
1577247	CAGCGCAACAAC-CAGCGCAACAAC-CAGCGCAACCGC	Design primers
1679185	GGGGTAGCGGGTTAGCGGGTTAGC	Design primers
1685582	GCCGTCGACTCCGCTGTCGACTTCGCCGTCGACCCG	Design primers
1688865	GCCGAAACTGCCGGAACTGCCGGAACT	Design primers
1691416	GGGCACGAGGGCAAGAGGGCAAGA	Design primers
1694845	CTAAGGTCACTAAGGTCGCGAAGGTCA	Design primers
1696720	ATCGAACGG-TTCGAACGG-TTCGAACGG	Design primers
1723350	GTGACGT-GTGACGT-GTGGCGT-GTGGCGT-GTGGCGT-GTGGCGT	Design primers
1744521	CGAGCGCC-TGAGCGCC-TGAGCGCC-TGAGCGCC	Design primers
1745441	AATTGGGTG-AATTGGGTG-AATTGGGCG	Design primers
1760153	CGACGCCGATGCCGACGCCGAGGC	Design primers
1766528	TGCGGGCGAATC-GGCGGGCGAATC-GGTGGGCGAATC	Design primers
1811169	CGCCCGCCGCTGCCCGCCGGCGCCTGACGC	Design primers
1811905	CGCCGGCGCAGGCGCCTGTGCCGG	Design primers
1820882	CAG-CGG-CGG-TGG-TGG-CGG-CGG-CGG-TGG-CGG-TGG-CGG-CGG-TGG-CGG	Design primers
1820928	GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT	Design primers
1820974	GCG-GTG-GTG-GTG-GTG-GTG-GTG-GTG-GTG-GTG-GTG-GTG-GTG-GTG-GTG-GTG	Design primers
1821027	GGTGGCGGCGGTGGCGGTGGCGGTGGCGGCGGTGGT	Design primers
1821106	GCGGCGGTGGCGGCGGTGTCGGCG	Design primers
1839379	GCCGATTTCGCTGATTTCGCCGATCTC	Design primers
1877695	CGAAGCAGAAGCCAGGCAGAAGCCAGGCAGAAGCGAGGCAGGAG	Design primers
1887662	AGCGCATCAACGCATCAACGCATC	Design primers
1888678	AGGCCGACGCCGTGGCCGAGGCCG	Design primers
1905740	CGG-CGG-CGG-CGG-CGG-TGG-CGG-CGG	Design primers
1908945	GAATCGCAGGAATCGCCGGAATCGCAGGAAGCGCAG	Design primers
1936262	TGGACGTCGGTTCGACGCCGGTTCGACGCCGGT	Design primers
1936296	AGAGGCCGGTT-AGAGGCCGGTT-AGAGGCCGGTT	Design primers
1945857	GGCCTGAG-CGCCTGAG-CGCCTGAG	Design primers
1955850	CTGTTATGTGCGCCTTTTATGTGCGCCTTTTATGTGTGC	Design primers
1964389	CGTCGCGA-CATCGCGA-CATCGCGA-CATCGCGA	Design primers
1964424	CGTGACATCGCGACATCGCGACAT	Design primers
2034296	TCACCGGTCGCACCGGTCGCACCGGTCTCATCGGTC	Design primers
2035047	CCCCGGTCGCCCCGATCGCCCCGATCG	Design primers
2037484	TGCGCACGA-TGGGCACGA-TGGGCACGA-TGGGCACGA-TGGGCACGA	Design primers
2042788	TCGAGGGGATCGAGGGGGGCGAGGGGATCGAGGGGA	Design primers
2076875	CCCGAAAACGGAACGGTTCCAAAAGCGGAACGGTTCCGAAAACGGAACAGT	Design primers
2112749	GCTTGACGTGCTTGGCGTGCTTGAGGT	Design primers
2120867	TCGGTGGCGTGTCGCTTGCGTGTCGCTTGCGTGTCGGGGGCGTG	Design primers
2130343	TCAGGCCGGGATAAGGCCGCGATAAGGCCTGGATAAGGTCGGGA	Design primers
2131454	GCACCCCAG-GCACCCCAG-GCACCGCAG	Design primers
2133218	GGCAGACGTGCCAGACGTGCCAGACGT	Design primers
2143196	CGCGCCTGCGCCCGCGACCACGCC	Design primers
2148632	GGGGCTGGCGCTGGTGCTGGGGTT	Design primers
2156950	AATTGCCGCCGATCGCCGCCGATCGCCGCC	Design primers
2161200	CTCGCCTTCCTCGCTTTCCTTGCCTTC	Design primers
2173618	GTGCAGATGCAGGAGCAGATGCAG	Design primers
2193569	CGTGATACGTAATACGTGATGCGTGATG	Design primers
2206504	AGTGGGCGC-AGTGGGCGC-AGTCGGCGC	Design primers
2217979	AATTGCGGC-GAATACGGC-AAATACGGC-AAATACGGC-AAATACGGC-AAATACGGC	Design primers
2218037	CAGCGAGACGGCGAGACGGCGAGA	Design primers
2229277	GGTTTGGCCGGCTTGGCCGGTTTGGCC	Design primers
2233302	CTCAATCTC-CTCCATCTC-CTCCATCTC-CTCCATCTC	Design primers
2233375	CCGCGTTTC-CCGCGTTTC-CCACGTTTC	Design primers
2245433	CGCCCGACG-CGTCCGATA-CGTCCGATA-CGTCCGATA-CGTCCGATA-CGTCCGATA	Design primers
2252371	GGCGGGCATGGCGGGCACGTCGGGCATGGCGCGCAT	Design primers
2257945	ACGCGATCA-TCGCGATCA-TCGCGATCA	Design primers
2260721	GGTTAGCGGGTGGCAAGCGGGTGGCAAGCGGGT	Design primers
2276346	TTACCGCGTTACCGCTTTATCGCG	Design primers
2295735	AAGGGGCCAACGGGCCAACGGGCC	Design primers
2301595	GCGCAATAC-GCGCAATAC-GTGCAATAC-GCGCAGTAC	Design primers
2327026	GTCGCTGGCGTCGATGGCGTCGATGGC	Design primers
2336509	CAAGCGGCAAGTCAGGCGGCAAATCAGGCGGCAAGC	Design primers
2342007	GAGCCG-GCGCCG-GCGCCG-GAGCCG	Design primers
2361643	CGATGGCGGTGGGGATGGCGACGG	Design primers
2376807	GCGCGATGCAGCCCGATGAAGCACGATGAA	Design primers
2380947	AAGGGCTGAAAGGGTTGAAAGGGTTGA	Design primers
2388797	GCTCATTACTGCTCACTACTGCTTACTACT	Design primers
2420816	GTGTGTCGGCGTGTCGGCGTGTCG	Design primers
2580882	GAAAGTCAGGCGACGGAAAGTCAGGCGCCAGAACGTCATGCGCCG	Design primers
2612890	CTCCTATCC-GTCCTATCC-GTCCTATCC-GTCCTATCC	Design primers
2664190	CGGCGATGGCGACGATGGCGACGATGG	Design primers
2693301	GCCGCCGCCGTCTCCGCCGCCGCG	Design primers
2714997	CGGATCGCGGCGAAGGGTGGCGAAGGGTGGCGAAGGGTGGCGGATGGCGGCGGATGGCGG	Design primers
2737119	TACGCGGCAACTGCGAGCGCGGCAACGGCGAGCGCGGCAACGGCG	Design primers
2743948	CCGATGGCTCGGCGATGGCCCGGCGATGGCTCG	Design primers
2746096	CTGCGCGAAGCCGCGCGACGCGGCGCGACG	Design primers
2757425	CCCTCTTCC-CGCTCTTCC-CGCTCTTCC-CGCTCTTCC-CCCTCTTCC	Design primers
2792300	ATCACGGA-TTCACGGA-TTCACGGA-TTCACGGA	Design primers
2825742	CGCCCTA-GCCCCTA-GCCCCTA-GCCCCTA-GCCCCTA-GCCCCTA	Design primers
2825798	GCGCCATTGGGCCATTGGGCCATT	Design primers
2833844	AACAATCGCCGAACAACCGCCGAACATCCGCCG	Design primers
2871089	AGCGCCGCATCGCCGCACCGCCGC	Design primers
2888908	GATGGCGGCTGGCGGATGGCGGGTGGCGGGTGGCG	Design primers
2933421	CTTCCGCTT-GTTCCGCTT-GTTCCGCTT-GTTCCGCTT	Design primers
2950804	TTGCTGCCTTCGTCACTGCCTTCGTCACTGCCTTCG	Design primers
2953655	CTCGGCTTCGGCGTCGGCCTTGGC	Design primers
2966828	AACGACG-AGCGACG-AGCGACG-AGCGACG-AGCGACG	Design primers
2983003	GGCGACTCA-GGCGACTCA-GGCAACTCA-GGCAACTCA	Design primers
2994015	CGCCGAACG-TGCCGAACG-TGCCGAACG	Design primers
2997468	GACGCTCC-GACGCTCC-GGCGCTCC	Design primers
3003005	CGGCGGAAACGGTGGAAACAGCGGAAA	Design primers
3019552	TACGGCAAACGAC-AGCGGCAAACGAC-AGCGGCAAACGAC	Design primers
3028211	CCCATGCGCGCCACATGCGCCCCCCATGCGCCT	Design primers
3030800	CTCAGAGCACTCTGAGCACTCGGAGCACTCAGAGCA	Design primers
3076234	TTGGTTCTTGGTTACTGGTTCTTGGTTA	Design primers
3094503	TTGCCTGATTTGCCCGATTCGCCTGAT	Design primers
3101807	CGTCGCGCCGCGACGCGTGGCTTCG	Design primers
3105629	CTCGGCCTTCACGGCCTTCACGGCCTT	Design primers
3112942	GCTGGCGCTGCCGGCGCTGCCGGCGCT	Design primers
3114046	CGACAG-CGACAG-CGGCAG-CGTCAG	Design primers
3114952	CTGTGCTGCGGGCGC-CTGTGCTGCGGGCGC-CTGCACTGCGGGAGC	Design primers
3119657	CCTGTGGAGCTTGTGGAGCCTGTGGCG	Design primers
3188816	GGCGTGCCG-GGCGTGCCG-GGCGTGGCG	Design primers
3199077	ACGTCGCC-ACGTCGCC-ACGTCGAC	Design primers
3199130	CGCGCTGGTCGCGCCGGTCGCGCTGGT	Design primers
3204194	ATACGCACATCGATGCGCACATCAATGCGCACGTCG	Design primers
3211189	CGGCGC-CGGGGC-CGGGGC-CGGGGC	Design primers
3219945	CGCTTCAGCCGTTTCAGCCGTTTCAGC	Design primers
3219975	TTCAGCCGTTTCAGCAGTTTCAGCCGT	Design primers
3238445	CCCCCACGCCCCCCGCCCCCGCCCCCGCCCCCCGCCCCC	Design primers
3238504	CCCATCCGACCCATTCGACCCATCCGC	Design primers
3247595	CCTCCGT-TCTCCGT-TCTCCGT-TCTCCGT	Design primers
3311733	ATGCACCACGATGCACCCCAATGCACGCCG	Design primers
3314998	GGTTCGGGT-GACACGGGT-GACACGGGT-GACACGGGT-GACACGGGT-GACACGGGT	Design primers
3315898	CCCACGCGCCCCACGCGCCACATGCGCCCCATGCGCGCCATGCGCCCCATGCGC	Design primers
3319065	GGAGATGAAGGAAATGAAGGAGATGAA	Design primers
3350098	CGC-CGC-AGC-GGC-AGC-GGC-AGC-GGC-AGC-GGC-AGC-GGC	Design primers
3356749	ACGCAACAACAACGTAATAACAACGCAATAACAACGCAATAACA	Design primers
3358461	ACGGACACGCACGAACACGCACGCGCACGCACGGGCATGCACGGGCATGC	Design primers
3374328	GCGCCGACGCCGGCGCCCGTGCCG	Design primers
3384471	CCTCACCGA-GCTCACCGA-GCTCACCGA	Design primers
3387612	GCCGCCGCCGACGCCGCGGCCACC	Design primers
3388215	GCATTC-GCATTC-GCATCC-GCATCC	Design primers
3392210	CGTCACCCGCGTCACCCTTGTCACCCG	Design primers
3401165	TC-CC-CC-GC-TC-CC-CC-AC-TC-CC-CC-GC	Design primers
3401190	TCCCCCGCT-TCCCCCGCT-TCCCCCGCT	Design primers
3451909	CGACATCCGCAACGACCTACGCAACGACATACGCAA	Design primers
3461932	CCGACACGC-CCGACACGC-TCGACACGC	Design primers
3464423	TTCTGCTTCT-TGCTGCTTCT-TGTTGCTTCT	Design primers
3482889	CTTCGTCA-TTTCGTCA-TTTCGTCA-TTTCGTCA	Design primers
3483944	ACGGCACTTACTGCACTTACGGCACTT	Design primers
3492180	CGCGTCGCCCCGTCGCCTCGTCGC	Design primers
3497764	CCGGCACAGCGGCAGCACAGCGGCGGCACAGCG	Design primers
3545024	GCTTCCGGC-ACTTCCGGC-ACTTCCGGC-ACTTCCGGC-ACTTCCGGC	Design primers
3545616	AGGCAACTGTGGGCAACGGTAGGCAACGGT	Design primers
3554142	GAATCGGCGCGAAGCGGCGCGCATCGTCGC	Design primers
3554299	CGTCGATTT-CGTCGATTT-CGTCGATGT-CGTCGATTC	Design primers
3584360	CCGATGCACCCGATTCACCCGATTCAC	Design primers
3598764	CCGGCGAT-CCGGCGAT-CCGACGAT	Design primers
3608505	CCGGCGGAA-GCGGCGGAA-GCGGCGGAA	Design primers
3649868	TGCCGGGCACGTGGCGGGCACATGGCGAGCACG	Design primers
3652752	GACTCC-GGCACC-GGCACC-GGCACC-GACACC-GACACC	Design primers
3654848	GGTTTGGTCGGCGGTTTGGGGGGCGGTTTGGGCTGC	Design primers
3656657	CCGAAGGCAGCCCCGAAGACCGCCGCGAAGGCAGCTCCGAAGGCCGCC	Design primers
3662319	CGCGCGCCAATGCGCGTCAATGCGCGTCAA	Design primers
3668182	GCTGGCGCTGGGCCTGGCGCTCGC	Design primers
3701297	CATTTCGCGTCGTTTCGCGTCATTTCTCAT	Design primers
3702612	CGGGTCCAC-GGGGTCCAC-GGGGTCCAC	Design primers
3708682	TCGTCTGTCTCGTCGGTCTCGTCTGTC	Design primers
3716340	TCGGATTGACGTGGATTGACGCGGAATGAC	Design primers
3747698	GGTGCCTTGGGGTCCCGTGGGGTCCCTTGG	Design primers
3757356	CAGTGGGATCGGTGGGATCGGTGGGAT	Design primers
3766593	TTGGCACCC-TCGGCACCC-TCGGCACCC-TCGGCACCC	Design primers
3768614	TCCTGGTTG-TCTTGGTTG-TCTTGGTTG-TCTTGGTTG-TCTTGGTTG	Design primers
3771028	CACGCTAT-CCCGCTAT-CCCGCTAT-CCCGCTAT	Design primers
3789339	CCGCGTCGTCAGCGTCGTCCGCGTCAT	Design primers
3800133	TCCCCCCT-GCCCCCCT-GCCCCCCT	Design primers
3801103	TCTTGCGGCTTCTTGGCGCTTCTTACCGCT	Design primers
3809744	CGGTAACGTCGGCAACGTCGGTAACGC	Design primers
3820173	CGGCTCGAAGGCGACTCGATGGCGGCTCGGTGG	Design primers
3828044	CGTGCTCGTGGTCGTGCTCGTGGTCGTGCC	Design primers
3833614	GTCGGACGAGGCGGACGAGGCGGACGA	Design primers
3840320	GACGGGGCGGGGCGGGACGCGACGC	Design primers
3845890	TCGATTTCG-ACGATTTCG-ACGATTTCG	Design primers
3845970	GCGGCCTTG-TCCGTCTTG-TCCGTCTTG-TCCGTCTTG-TCCGTCTTG-TCCGTCTTG-TCCGTCTTG-TCCGTCTTG-TCCGTCTTG-TCCGTCTTG	Design primers
3856449	CGCCGAATCACGCCCAACCACGCCGAATCGCGACGCATCA	Design primers
3865524	GGCTCCGGCCCCGGCACCGGCACC	Design primers
3866105	CTCGCGACGCCTTTCGACGCCTTTCGACGC	Design primers
3892552	GCTTCGCCCGCCGCTTCGTCCACCGGCTCGCCCGCC	Design primers
3910168	ACGAACGGT-GCGAACGGT-GCGAACGGT	Design primers
3915911	CCAGCGTTGCCGCCAGCGCCGCCGCCAGTGGTGCCG	Design primers
3934352	GGCGAATGGCA-CGCGAATGGCA-CGCGAATCGCA	Design primers
3944069	GCTTCGGGGCATCGGGGCATCGGG	Design primers
3946646	GCGACAGACGCGACACACGCGACACAC	Design primers
3982147	GATGAA-GACGAA-GACGAA-GAGGAA	Design primers
3997647	GCCGCTACTCGCCAATACTCGCCAATACTCGTCGCTACTCACCGCCACTC	Design primers
4002877	GGCGCCT-GGCGCTT-GGCGCTT-GGCGCTT-GGCGCTT-GGCGCCT	Design primers
4030627	TTTTGATGTGATTTGATGGGTTTTGATGAA	Design primers
4054524	GCGTCGGCGGCGGCATCGGCGTCG	Design primers
4062622	CTCGCGCACGCGCTCGAGTTCGCG	Design primers
4090368	TCACGA-CCACGA-CCACGA-TCACGA	Design primers
4091725	GCGCCG-GCGCCG-ACGCCG-ACGCCG	Design primers
4100569	GGTCGTGT-GGTCGTGT-GGACGTGT-GGACGTGT	Design primers
4167928	CGCCATGC-CGCCATGC-CGCAATGC	Design primers
4190800	CTCGACTTTCC-CGCCTCTTTCC-CGCCTCTCTCC-CGCCTCTTTCC-CGCCTCTCTCC-CGCCTCTTTCC	Design primers
4201126	CCTGGTGGC-CTTGGTGGC-CTTGGTGGC-CTTGGTGGC	Design primers
4211916	CGCGCC-TGCGCC-TGCGCC-TGCGCC	Design primers
4243083	GCCGCTCGTCAGCCGCTCATCAGCCGCGCGGCA	Design primers
4247540	CGCGG-CGCGG-CGCGC-CACGG-CGCCG	Design primers
4248119	GCGGCCTC-ACGGCATC-ACGGCATG-ACGGCATC-ACGGCATC-ACGGCATC-ACGGCATC-ACGGCATC	Design primers
4277582	GCCCATGCCCGTGCCCACGCACAT	Design primers
4288434	CGAAGCGGACGAAGCGGCCGAAGCCGA	Design primers
4294595	GGCGGCTGCGGCGGCGCCCGCGGC	Design primers
4296788	CTCCCTTCGT-TGCGCTTCGT-TGCGCTTCGT-TGCGCTTCGG-TGCACTTCGT-TACGCTTCGT	Design primers
4351023	GGCGCG-GGCGCG-GGCACG-AGCGCG	Design primers
4399978	GGAGACGGCGGGGGACGCCGGGAGACGCCGGGAGACGGCA	Design primers
4400143	GCAGCTCAT-GCAGCTCAT-GCAGCTTAT	Design primers
4414923	GCCCC-GCCCC-ACCCC-ACCCC-ACCCC-ACCCC	Design primers
4467960	CAAGGCTGCCAAAGCTGCCAAAGCTGC	Design primers
4468020	TGCGACGAA-GGCGACGAA-GGCGACGAA	Design primers
4468155	CCAAAGCGCCCGAAGCGCCCGAAGCGC	Design primers
4476606	AGGAGGGAG-AGGAGGGAG-AGGAGGAAG	Design primers
4478613	AGGGCTCAATAGGGCTAAATGGGGCTAAATAGGGCGCGAT	Design primers
4486063	CCCGCTGCTC-GTCGCTGCTC-GTCGCTGCTC	Design primers
4519355	CCGGCTGAGGCTCGACTGAGGCTCGACTGAGGC	Design primers
4533420	TCACGCTCAAGCTCGCGCTCACGA	Design primers
4582497	CGAATCGCCCGAATCACCCGAATCGCT	Design primers
4586206	AGCCGGATA-CGCCGGATA-CGCCGGATA	Design primers
4597773	GTCGCCATAT-CGCGCCATAT-CGCGCCATAT	Design primers
4604808	CCTCGCCCTCTTCGCCCTCCTCGCCCTCTTCGCCCT	Design primers
4614961	CGCCACACC-AGCCACACC-AGCCACACC	Design primers
4630249	CGCCGCCACGACGCCACGCCGCCA	Design primers
4636526	GCCCCATGAGGCCCATGAGGCCCATGA	Design primers
4664588	GCGTCGGGTGCGTCGGGCGCCTCGGGT	Design primers
4666294	GCCGTCGGG-CGCTTCGGG-CGCTTCGGG-CGCTTCGGG-CGCTTCGGG-CGCTTCGGG	Design primers
4704890	GCCG-GGCG-GGCG-GGCG-GGCG-GGCG	Design primers
4720105	TGTTCATCGTTGC-TGTTCGTAGTTGC-TGTTCGTAGTTGC-TGTTCGTAGTTGC-TGTTCGTAGTTGC	Design primers
4722705	GTGCCCGATGTGGCCGATGTGCCCGAT	Design primers
4734429	CCCTGACTCACTGACTCCCTGACT	Design primers
4740891	TCTCCCCCCGTCTCTTCCCGTCTCTCCCCG	Design primers
4756846	GCCGTCATA-GCCGTCATA-GCCGTCGTA	Design primers
4795045	CGCGCCGGGCCGCGTTGCGCCGGGC	Design primers
4802206	CGCGT-CGTGT-CGTGT-CGTGT-CGTGT	Design primers
4833056	CGCACCGCCCCACCGCCCCACCGC	Design primers
4837992	GATTGACTCGCGACTGACTCGCAATTGATTCGC	Design primers
4840898	CATGCCCGCCACGCCCGCCATGCCCGG	Design primers
4849661	GGGGAAGGGAAAGGGAAAGGGAAAGGGAAA	Design primers
4866103	TGTATCGC-GGTATCGC-GGTATCGC	Design primers
4894696	TCGTGG-TCATGG-TCATGG-TCGTGG	Design primers
4920633	GCCGATCACCCGCCGATCACCTGCCGGTCATCCGCCGGTCATCC	Design primers
4920699	ACCCTTACGACCCTTACATCCCTTACG	Design primers
4931015	CCGGCACAC-CCGACACAC-CCGACACAC-CCGACACAC	Design primers
4939087	ACCGGTGCA-AACGGTGCA-AACGGTGCA-AACGGTGCA	Design primers
4950048	ACCTTCACCACCTTCACTCCCTTCACC	Design primers
5009438	CCCATAAC-GCCATAAC-GCCATAAC	Design primers
5046873	GTCACGCGAGCCACGCGATTCACGCGA	Design primers
5055364	GGATTCCGC-AGATTCCGC-AGATTCCGC	Design primers
5064664	TGGCGGCGTTGGCGGCGGTGGCAGCGT	Design primers
5065806	CGGGATATTCACTGGATATCCACGGGCTATCCA	Design primers
5074608	CGCAGTAGTGCTGGAG-TGCAGTAGTGCTGGAG-TGCAGTAGTGCAGTAG	Design primers
5076494	GCGCTGCGAAGCCCTGCGCAGCGCCGTGAA	Design primers
5077911	GCCGGCGATT-TACGGCGATT-TACGGCGATT	Design primers
5082390	TTCAGCGG-ATCAGCGG-ATCAGCGG	Design primers
5089444	CTGTGG-CCGTGG-TCGTGG-CTGTGG-TCGTGG-TCGTGG-TCGTGG-TCGTGG-TCGTGG	Design primers
5133639	GACAAGCGGGGGT-GAGAAGCCGGGGT-GAGAAGCCGGGGT-GAGAAGCCGGGGT	Design primers
5156191	TGTCGCTGTG-TATCGCTGCT-TATCGCTGCT-TATAGCTGCT-TATAGCTGCG-TATCGCTGCG	Design primers
5168973	TCGGTG-TCGGTG-TCGTTG-GCGGTG	Design primers
5217334	CGCGCCGTC-CGCGCCGTC-CGCGCCGGC	Design primers
5221842	CCGGCGCTGCGGGCGCTGCGGGCGCTG	Design primers
5221907	CAGGCGACTCAGGCCACTCAGGCCACT	Design primers
5221935	AGGCGCATC-AGGCGCATC-AGACGCATC	Design primers
5223925	CCGGCAGCGCCGGCAGCACCGGCCGCG	Design primers
5233480	CGTGCCTGC-CGTGCCTGC-CGTGCCGGC	Design primers
5259001	GGG-GCG-GCG-GCG-GGG-GCG-GCG-GCG	Design primers
5265353	CTTCGATGACTTCGATTACTTCGAGGA	Design primers
5291370	TGCCGGTCCTGCCGGTACTGCCGGTCA	Design primers
5293791	ACGCCTCACA-CGCCCTCACA-CGTCCTCACA-CGTCCTCACA-CGTCCTCACA-CGTCCTCACA	Design primers
5298881	CGAGGCAGGACGAAGCAAGACGAAGCAGGA	Design primers
5324508	TGCTGCGGCGTCCGGCGGCGTGCTGCCGCT	Design primers
5371788	TCGTCTTCATCTTCGTCCTCGTTTTCGTCCTCGTTTTCGTCC	Design primers
5376783	GGCGTGCTTCCTGGCGCGCTTACTGGCGCGCTTCTT	Design primers
5388939	GTGTCGGGC-GTGTCGGGC-GTGCCGGGC-GTGCCGGGC	Design primers
5409283	GGCAATCACAGGCAATAGCAGGCGATAACAGACAATCACC	Design primers
5422410	TACCACGCTTACGACGCTTACCACGCTTACCACGCT	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

33386

CGATGGAATG-CGACGGAATG-CGACGTAATG-CGACGGAATG