Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Isoptericola variabilis 225

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
19178	GAGAGCGCTGGAGTTGGCGAGGTAGCGCTGGAGTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGAGTTGGCGAGGTAGCGCTGGGCTTGGCGA	Design primers
19669	TCGCCG-TCGCCG-TCCCCG-TCACCG-TCGCCC-CCGCCG-TTGCCG	Design primers
19712	CGTTGCCGCGGTTGCCGCCGTTGCCGC	Design primers
24771	GCGTGGCCCCGCGGGGCGCCACCTGGCCCC	Design primers
34971	CGCGGG-CTCCGG-CTCCGG-CTCCGG-CTCGGG-CTCGGG	Design primers
37489	GGCCGTGCCGGGGCGGGTCGGGCTG	Design primers
42905	GTAGCGCTGCACGGCGCGAAGTAGCGCTGGATCTCGCGAAGTAGCGCTGCACGGCGCGAAGTAGCGCTGGACCTCGCGAG	Design primers
42994	CGTTCGCGCTACCTCGGCGA-AAAACGCGCTACCTCGGCGA-GAGACGCGCTACCTCGGCGA-GAGACGCGCTACCTCGGCGA	Design primers
56173	CGACCCGCCGAGGTAGCGCGTTTCCCGCCGAAGTAGCGCGTTTCCCGCCGAGGTAGCGTG	Design primers
56284	GCGGAGCGCTACCTCGCCGGGCGGAGCGCTACCTCGCGGGGGGACGCGCTACCTCGGCGG	Design primers
80228	CGTGCGGCCGTCAGGCGGCCGTCGTGCGGCCGT	Design primers
80410	GCCGGTCAGCCGCCCGTCAGCTGCCCGTCAGTCGCCGGTCACCG	Design primers
87748	CCGCCGACGCCGCGGCCGACGCCG	Design primers
105089	GGCGGCGGTGGTGGCGGTGGCGGCGGT	Design primers
126958	GCCGTC-CCCGTC-GCCGTC-GCCGTC	Design primers
127092	CACCAGAGCCTGAGGATCCGACAAAGGACCCTGAGGATCCGACAAAGGACCCTGAGGATCCGA	Design primers
142301	TCGCCGCGCCCCGCCTCGCCTCGTCTCGTCCCGCCTCGTC	Design primers
143207	GCCGCGGGTGCCGGCGCGGGTGCTGGCGCGGGCGCC	Design primers
148095	CGGCCCGCTACTTCGCGACGCCGAGCGCTACTTCGCGACGCCGAGCGCTACTTCGCGCCG	Design primers
148156	CCCGCGCTACTTCGCGCCGGCCCGCGCTACTTCGCGTCGGCTCGCGCTACCTCGCGGTGG	Design primers
151369	CCCCCCGCGAGGTAGCGCTGGACCCCGCGAGGTAGCGCCCGACGCCGCGAGGTAGCGCAGAATCCCGCGAGGTAGCGCGG	Design primers
161274	TCGCATCTCGCGAAGTAGCG-CACCATCTCGCGAGGTAGCG-CTGCATCTCGCGAGGTAGCG-CTGCATCTCGCGAGGTAGCG-CTGCATCTCGCGAGGTAGCG	Design primers
200027	CGCCGCGAGCGC-CGCCGCGAGCGC-CGCGGCGACCGC	Design primers
205094	GCCGGAGTCGGAGCCGGAGCCGCA	Design primers
206525	CCTCGCCGAGCGCGACGCCGAGCGCGGCGCCGAGCG	Design primers
207970	GCCGCGGGACCGGGGGTCGCGGGGCCGGTGCCCGCGGGGCCGGTGCCCGCGGGGCCGGGGGCCGCGGGCTCGCGG	Design primers
224079	ACCGCCACCGTCACCGCGAGCGCC	Design primers
227316	TGGCGATCGCGACGGCGATCGCGA	Design primers
227394	CCAGCCCGAGCGCGTGCCCGAGCGCCAGGCCGAGCG	Design primers
237541	AGGGTCGGCGCCGCCTGCGCCGGGCTCAGTGCCGCCTGCGCCGGGCTCAGTGCCGCCTGCGCC	Design primers
239009	AGCCACGAGAGCCACGACGGCCACGAG	Design primers
241075	CGCGGCCGCCGCCGCGGGCTCGGC	Design primers
245408	GACGGTCCCGGCGACGGTGACGGCCCGGGTGACGGTGACGGCCCGGGTGACGGTGACGGCCCGGGTGACGGTGACGGTCCGGGTGACGGTGACGGCCCCGGCGACGGC	Design primers
245517	ACGACGGCA-CCGACGGCA-ACGACGGCA-ACGACGGCA-ACGACGGCA-CCGACGGCA	Design primers
251658	CGATGAAGATGACGATGCCGAGGA	Design primers
255845	TGCCGTGAG-CGCCGTGAG-CGCCGTGAG-CGCCGTGAG	Design primers
269029	GCGACCCCCGCT-CCCACCCCCGCT-CCCACCCCCGCT-CCCACCCCCGCT	Design primers
275828	GCGCGTTCCCGCGCTACTTC-GCGGACTCGCGCGCTACTTC-GCGGACTCGCGCGCTACTTC-GCGGACTCGCGCGCTACTTC	Design primers
279175	CGTCGCCGTCGTCGACGCCGCCGC	Design primers
280161	CGG-CGA-GGC-CGC-CGA-CGG-CGC-CGG-GCA-GCT-CGC-CGA-CGG-CGC-GGG-CGA-GGC-CGC-CGA-CGG-CGC	Design primers
304862	TCGTGCCGCTCGTGCTGCTCGTGCTGC	Design primers
315072	GGGCGAGGGCGGCGGCGACGGCGA	Design primers
318413	CTCGGG-CTCGGG-CTGGGG-CTCGGG	Design primers
344013	TGACGAGGTAGCGCACTTCTCGCCGAGGTAGCGCACTTCTCGCCGAGGTAGCGCGATTCTCGCCGAGGTAGCGCGTTTCT	Design primers
344142	TCGCGACGCGGAGCGCTACTTCGCGGGCCCGAGCGCTACTTCGCGACGCGGAGCGCTACTTCGCGACGTGGAGCGCTACC	Design primers
372220	CCGCGAGGTAGCGCTCCGGCTCGCGAGGTAGCGCGCGAGCTGGCGAGGTAGCGCTCGGGC	Design primers
372419	GCTGTGCGCTACCTCGGCGGGCTGTGCGCTACTTCGCGGAGGGGCGCGCTACTTCGGCGGGCTGTGCGCTACCTCGTCAG	Design primers
375654	CGAGCCCGGGCCCGAGGCCGAGCCCGAGAC	Design primers
376152	GGGCGAGGCCGACGGCGACGGCGA	Design primers
383068	GCCCGGCCCTGCGCGGCCTGGCGCG	Design primers
385472	GCGGCGGCGGCGGGGGCGGTGGCG	Design primers
414470	CTCGGTGGACGGCTCGGTGCTCGGCTCGGTGGACGG	Design primers
426208	CGCCGGAGCCGGCGCCCGCGCCGG	Design primers
426303	CGCGCGGCGGGGCGTGCAGCGGGGCGCGCGGCCGGACGCGCCGCGGGG	Design primers
442377	GTCGGGGCG-GTCGGGGCG-GTCGCGGCG	Design primers
458852	GCTCGACGGCGTCCGGTGCGACGGCGTTCGGCGCGATGGCGTGCG	Design primers
465008	CGCGCTCGCGCGGGCGCTCGCGCC	Design primers
466231	CCCCGCGCCGGCCCCGTGCCGTCGCCCCGCCGG	Design primers
467219	GTCGCG-GACGCG-GACGCG-GACGCG	Design primers
480176	ACGCGCGCCGCACGGGCGTCGCCCGCGAGCCGC	Design primers
482831	GTCGCGCGCTACGTCGCGCGCTCGTGCGCTACCTCGCGGGGTGGGGCGCTACCTCGCGGG	Design primers
496980	CGGCGCGGTGCCGCGCGGCGCGGCG	Design primers
511767	CTCGCGGCGAGGTAGCGCTCGGCTCGGCGAGGTAGCGCACGGCTCGGCGAGGTAGCGCTCGGCTCGGCGAGGTAGCGCAC	Design primers
511848	CGACGCGCTACTTCGGCGGGCGCAGCGCTACTTCGGCGCGTGCGGCGCTACCTCGGCGGG	Design primers
513555	GCCGCGGCCGAGGCCGCCGACGCG	Design primers
519401	CCTACCCGCCGAGGTAGCGC-TCCGCACGCCGAGGTAGCGC-TCCGCTCGCCGAGGTAGCGC-TCCGCTCGCCGAGGTAGCGC-TCCGCTCGCCGAGGTAGCGC-TCCGCTCGCCGAGGTAGCGC	Design primers
537195	CGCCGCCGCGGCCGCCGTGGCCGC	Design primers
538824	CGCCCGCGAGGTAGCGCTCCACCCGCCGAGGTAGCGCTCCACCCGCCGAGGTAGCGCTCC	Design primers
542477	TCGTGCTCGTACTCGAGCTCGAGC	Design primers
569879	CGAGCTCGAGATCGCGCTCGAGCG	Design primers
578952	CTCGTGACGCGTGCCCACCACGGGACCCGTGCCCACCACGGGACCCGTGCCCAC	Design primers
587640	CAGGACGCGCTACCTCGTCG-CGAAACGCGCTACCTCGGCG-GGGAACGCGCTACCTCGGCG-GGGAACGCGCTACCTCGGCG-GGGAACGCGCTACCTCGGCG	Design primers
593676	CGCGTTCTGCGCTACCTCGGCGGGTGGAGCGCTACCTCGGCGCGGGGTGCGCTACCTCGGCGCGGGGTGCGCTACCTCGGCGGGTGCTGCGCTACCTCGC	Design primers
602745	AGGCCGACTCGCCGAGGTAG-CGCTCGGCTCGCCGAGGTAG-CGCTCGGCTCGCCGAGGTAG-CGCTCGGCTCGCCGAGGTAG	Design primers
602826	GCTGCCCGCGGCGACGTAGCGCTGCATGCGCCGAGGTAGCGCTGACCGCGGCGACGTAGC	Design primers
609263	CGACCT-CGACCT-CGTCCT-CGGCCT-CGACCA	Design primers
609968	CAGGCCGAGCAGCACGCGCCCGAGCAGCACCCGGCCGAGCAGCCG	Design primers
616473	GGCCGCGGCGGCGGCCGAGGCCGC	Design primers
619490	AGGCCGAGCCCGACGCCGAGACCG	Design primers
631919	CGGGCGTCGGTGCCCCGGACGCCGGTGCCCCGGACGCCGGTGTCC	Design primers
646171	CCCCGAGCGCGACGTCGCCTGCCAGCGCGACGTCGCCTGCCAGCGCGACGTCGCCTGCCAGCGCGACGTCGCCTGCCAGCGCGACGTCGCCCGCGAGCGCGGCGTCGC	Design primers
648528	GACCGTCGCGCCCGA-GACCGTCGCGCCCGA-GACGATCGCTCCCGA-GACGATCGCCCCCGA-CACGGTCGCGCCCGC	Design primers
658824	GGCGTCGGCGACGGCGGCGACGTC	Design primers
660083	GAGCCGGTGCCGGGGCCGGCGCCG	Design primers
677720	CGCGAGGCGGCGCTCGGCGC-CGCGACGTAGCGCTCGGCGT-CGCGACATAGCGCTCGGCGC-CGCGACATAGCGCTCGGCGC-CGCGACATAGCGCTCGGCGC	Design primers
682197	CCTTCCCGTTGCCCTTGCCGTTGCCGTTCGCGTTGCCGTTCGCGTTGCCGTTCCCGTTGG	Design primers
682474	CGCGGGCGCGGACCCGGGCTCGGG	Design primers
687887	CCGCGAGCGCGACCGCGGCCGCGC	Design primers
691920	CGACGCCGCCGCCGGCGCCGAGGC	Design primers
696023	CAACCCGCTCACCGCGAGCCACCCGCTGACGGCGAGCCACCCGCTCACCGCCAGCCACCCGCTCACGGCGAGCCACCCGCTGACGGCGAG	Design primers
698139	GCGCGCGGCGCGTGCGGCGCGCGAGGC	Design primers
727333	ACCGACGTGCGGTGCC-CGTGACGTGCGGTGCC-CGTGACGTGCGGTGCC	Design primers
732216	GCGCGAGCGCGGGCCCGAGCGCGT	Design primers
765792	GC-GC-GT-GC-CC-GT-GC-GC-GA-GC-GC-GC	Design primers
802421	GCG-ACG-GCG-GCG-TCG-ACG-GCG-ACG	Design primers
815567	TTCCAGCGCTACCTCGGCGGATCGAGCGCTACCTCGGCGGATCGAGCGCTACCTCGCAGG	Design primers
817071	GCCCGGCACGGCCCAGCCCGGTCCG	Design primers
835307	ACGACGAGCTCGACGTCGAGCTCGTCGACGAGGTCG	Design primers
848648	GAGCACGAGCGCGAGCCCGAGCAG	Design primers
853544	GGCCGCCGCACCGGCCGACGCTCCGGCCGACGCTCC	Design primers
862630	CGCGAGCGCCAGCGCGAGCGAGAGCGCCAG	Design primers
869410	ATCCGCCGAGGTAGCGCACGATCCGCCGAGGTAGCGCGTTCTCGCTCGAGGTAGCGCACG	Design primers
878497	GACGCCCGACGTGCCGACCGACGTGCCGACCGACGT	Design primers
882611	ACG-CCG-ACG-TCG-CCG-CCG-ACG-TCG	Design primers
887415	CGCGGCGGTGCGCGACGGCGCGCGGCAGCG	Design primers
888311	TTCTCCGCCGACGTAGCGCG-TTTCTCGGCGACGTAGCGCG-TTTCTCGGCGACGTAGCGCG-TCTTTCACCGACGTAGCGCG	Design primers
888404	TGCAGCGCTACCTCGGCGTGCGGAGCGCTACCTCGGCGTGCGGAGCGCTACCTCGCCGCG	Design primers
899376	CCGCCGGACGGGACGCCGGACGAGACGGCGGACGGG	Design primers
909167	GGGTCGAGCGCCCCGAGCGGGCCGAGGGCGCCGAGCGGGCCGAGGGCGCCGAGC	Design primers
978431	GTCGACGTCGAGGTCGTCGTCGGC	Design primers
982875	CGGCGGGGTGCTCGGGGCCGGGGTGGTCGGCGCCGGCGTGCTCGG	Design primers
983763	GACGACGACGGCGTCGACCACGAC	Design primers
988447	CGCGCGAGGTAGCGCACGATTCGCCGAGGTAGCGCACGATTCGGCGAGGTAGCGCACGAT	Design primers
1007661	CGGCCGCGGCCACGACCGAGGCCG	Design primers
1020833	GCGATCACGGCGATCGCGGCGATCTCG	Design primers
1024920	CGCCGCGCCGTCGCGCGGCCGCGC	Design primers
1039074	GCGTGCCCGACGGCGTGCCCGGGGGTGCGCCCGACG	Design primers
1039972	CGCGC-CGCCC-CGCGC-CGCGG-TGCGC	Design primers
1042959	CCGCGCGCCGCCCGCGCGGCGGCGGCGCGGCGC	Design primers
1047482	GCGGCCGCGCTACCTCGCGAGAGAACGCGCTACGTCGCGAGAGAACGCGCTACCTCGCGG	Design primers
1063981	ATCGAGCGCTACCTCGCGGGATCGCGCGCTACCTCGGCGAGCGGAGCGCTACGTCGCGGG	Design primers
1077493	GTCCTC-GTCCTC-CTCGTC-GTCCGC-GTC	Design primers
1083988	CCGCCGCGGCCGGCGCCGCCGCGG	Design primers
1096834	CAGCTCGCGAGGTAGCGCTGCGCCCGGCGAGGTAGCGCTGCGCCCGGCGAGGTAGCGCTG	Design primers
1097976	GGCCGAGCGCGCCGCCGAGCGCGCGGCCGCCCGCGC	Design primers
1100180	CAGCAGCTCGGGCGG-CAGCAGCTCGGGCGG-CAGCAGCTCGGGCGG	Design primers
1100226	GGC-GGC-GGT-GGC-GGT-GGC-GGC-GGC	Design primers
1107798	CGGGCTCCGGCTCGCGCTCGGGCG	Design primers
1110626	CGCGCCGAGGTAGCGCGTTTCTCGCCGAGGTAGCGCACCTCCCGCCGAGGTAGCGCACCTCCCGCCGAGGTAGCGCACCTCCCGCCGAGGTAGCGCACCTCCCGCCGAGGTAGCGCGTCC	Design primers
1111567	ACGGCGCCACCTCGCCGAGAAGTGCGCTACCTCGCCGAGAAGTGCGCTACCTCGCCGAAA	Design primers
1115443	AGACCG-AGACCG-ACACCG-AGACCG	Design primers
1116282	CCGGCGACGACCTCGGTGACGACCTCGGTGACGACC	Design primers
1154702	CGACCTGGC-CGACCTGGC-CGACCTCGC	Design primers
1158380	CCGGCTCGGGCTCCGGCGTCGGCT	Design primers
1159143	GCC-GCC-CCC-GCC-GCC-GCC-CCC-GCC	Design primers
1165346	GCGCCG-GGGACG-GGGACG-GGGACG-GCGACG-GGGGCG	Design primers
1181587	AGGCCGCGGCCGACGCCGAGGCCG	Design primers
1181636	CGCCGAGTCCGCGGAGTCGGCCGAGTCCGCGGAGTC	Design primers
1194301	CCGCGCCGAGGTAGCGCACGATCCGGCGAGGTAGCGCACGATCCGCCGAGGTAGCGCACG	Design primers
1194863	CGCGCTACCTCGCCGGATCGTGCGCTACCTCGGCGGAGAGCGCGCTACGTCGGCGGGTCG	Design primers
1235164	CGGCTTGGGCTTTGGCTTCGGCAT	Design primers
1266193	CACGAGCGCGAGCACGATCCCGAGCACGAC	Design primers
1269486	CCGCGAGCGCGATCGCGAGCGCGA	Design primers
1277611	CGTCGGCGTGGGCGCCGGCGTCGT	Design primers
1288050	GCACCCCGC-ACACCCCGC-ACACCCCGC	Design primers
1310787	CGCGCGGCGCGGCGCCGCGGCGCGC	Design primers
1312030	CGC-GGC-CGG-GGC-GGC-GGC-CGC-CGC	Design primers
1322456	CGTCGTCGTCGGCATCGTCGTGGTCCTCGT	Design primers
1329859	CGGCGAGGACGGCGGCCACGACGGCGGCGACGACGG	Design primers
1332933	ACCGGCGGTCCGCGTCCGGGCGGTCCCCGTCCGGGCGGTCCGCGC	Design primers
1333099	GCGGTGGCGGCCCCGGCGGCGGCGGTCCGGGCGGTGCCGGCGGCG	Design primers
1333580	GGC-CGA-GGA-GGC-CGA-CGA-GGA-CGA-GGA	Design primers
1344782	CGTCGGTCGGGG-CGTCGGTCGGGG-CGTCGGTCCCGG	Design primers
1376256	GTGCGCATGCGCGTGCACGAGCGC	Design primers
1382368	CCGCGGCCGCGACCGCCGTCGCGG	Design primers
1397482	CCGCGCCGCCGCGCCCGCGCGCCG	Design primers
1412549	CGCCGCCGTCGCCGGCGCGGCCGC	Design primers
1422026	CGTGGTCGTCGTCGTGCTCGTGCT	Design primers
1423505	CGACGT-CGACGT-CGACTT-CGACGA	Design primers
1424322	GAGCTCGCCGAGCCGCTCGCCGAGGTGCTCGACGAG	Design primers
1447973	CGCGGCCCCGGCCCCGGCCCCGGCCGCCGC	Design primers
1451549	CGAGCTCCCCGCCGACCTCACCGCCGAGCGCCTCGC	Design primers
1464891	CGCTGCCCGACG-ATCTGCCTGACG-ATCGGCCCGACG-ATCTGCCCGACG-ATCTGCCCGACG-ATCTGCCCGACG	Design primers
1465590	CGCGACCGCGATCGCGGCCTCGAC	Design primers
1466579	GTC-GTC-GCC-GTC-GCC-GTC-GAC-GTC	Design primers
1468182	GGCCGAGGCCGCGGGCGAGGCCGT	Design primers
1483444	TCGCGGTCGAGGTCGCGCTCGCGA	Design primers
1531752	GCCGACGTCGACGTCGACGCCGAG	Design primers
1535266	GCGCTCGCCGAGGCGCTCGTCGGGGCGGTCGCCGCG	Design primers
1557641	CGA-CGA-CGG-GGA-CGA-CGA-CGA-GGA-CGA-GGA-CGA-GGA	Design primers
1604325	CGTCGTTCGCCGAGGTAGCGCGTTCTCCGGCGAGGTAGCGCGTTTCTCGCCGAGGTAGCG	Design primers
1604402	GCGCCGGTTCCGGCGCTACCTCGTCGGTTCGGGCGCTACCTCGCGGGATCCTGCGCTACC	Design primers
1642878	CGG-CGC-CGG-CCC-CGC-CGC-CGT-CGC	Design primers
1660142	CGCCG-CGCGG-CGCGG-CGACG-CGCGG	Design primers
1662315	CTCGCC-CTCGCC-CGCGCC-ATCGCC	Design primers
1663533	CG-GT-CG-CG-GT-GG-CG-CT-CG-CG-CT-CG	Design primers
1665091	CCCGCCCGGCGCCCCGCCGGCCGCCCCGCCCGCCGC	Design primers
1677489	GGCCGGGACCGGGGGCGGGGTCGG	Design primers
1683258	GCGGCGCGCGCGGCGGGCGCGGCGGGC	Design primers
1684075	GCAGGC-GCAGGC-GCACGC-GGAGGC	Design primers
1693576	GCGCCCGACCAC-CTGCCCGACCAC-CTGCCCGACCAC	Design primers
1719760	CGGCCGCACCGGCCGCGCCGGGCGCAC	Design primers
1774730	GCCCGCCCCGGCCCTCCCCGGTCCG	Design primers
1790305	CCTCGACGTCGACCTCGACCTCCA	Design primers
1827164	GCTCGAGGTCGAGCCCGAGCTCGG	Design primers
1877784	GCGCCCGCGCGCGGCCTCGCGCGCCCGGGC	Design primers
1878077	CCTCGCCGTCGCCCACGCCGTCGC	Design primers
1905404	GCGTCGAGCGCGGCGTCGTGCCCGACGACGAGCGCG	Design primers
1908414	GCCGCACCGGGCGCACCGGGCGCACCG	Design primers
1925028	CGGCGACGAGCGCGGCGGCGACCGACGCGACGAGCG	Design primers
1928901	CGGTGCGACGGAGGGTGCGGCGGAGGGTGCGGCGGA	Design primers
1929896	GGCGCTGCGCGCCGCGGTGCGGCGC	Design primers
1948338	CGGCTCGGCGGCAGTCTCGGCGGCCGGCTCGGCGTC	Design primers
1951083	GGCGCGCGGCGTCGCGCGCCGCCGCGCGGG	Design primers
1951234	CGCGCGCCGGCTCGCGCCCGCGCTCGACGG	Design primers
1954960	GCTCGTCGGACGGCCCGTCGGACGGCCGGTCGGACG	Design primers
1997869	GCCGGCCGAGGAGCCCGCGGAGGAGCCCGCCGAGCA	Design primers
1997971	CGGCGCCCAGGGCGGCTCGCAGGGCGGCGGCGAGGG	Design primers
1998307	GCCGGA-GCCGGA-GCCCGA-GCCCGA	Design primers
2030546	CCGGTCGCCCGACGACGGCGCGCCCGACGACGGCGCGCCCGACGA	Design primers
2071469	CATCGAGGTGGACGG-CACCGAGGTGGACGG-GACCGAGGTCGACGG-GACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG-CACCGAGGTCGACGG	Design primers
2081508	GCCGCGGTCGCGGCCGCCGCCGCG	Design primers
2097823	CGCCGTGCTCGCCGCGCTCGACGTGCT	Design primers
2100653	CCCCTCCGCGAGGTAGCGCG-TTCTCCCGCGAGGTAGCGCG-TCCCACCGCGAGGTAGCGCG-TTCTTCCGCGAGGTAGCGCG-TTCTTCCGCGAGGTAGCGCG-TTCTTCCGCGAGGTAGCGCG	Design primers
2100800	GTGCGCTACCTCGACGGAGAACGCGCTACCTCGGCAGAGAACGCGCTACCTCGGCGGAGA	Design primers
2113730	CGTCGAGCACGCCGCGGACGGCGCGCACGCCGCGGACGGCGCGCACGCCGAGGA	Design primers
2115431	TCGCCGTCCCCGGCGCCGTCGTCG	Design primers
2118235	CGCCCGCCCCCGCGCCGGTGCCCG	Design primers
2139939	ACGCCGGCGGCTGCGAGCCGGGCGGCGGCTGCGAGCCGGGCGGCGGCTGCGAGC	Design primers
2152202	GCCGCCGCCGAGGCCGCCGAGGCCAAGGCCGCCGCCGCCCAGGCC	Design primers
2170012	GCTCTTGCCCTTGCTCGTGCTCTTGCTCGTGCTCGT	Design primers
2179920	CGAGCGGCCTCACGG-CGAGCAGCCCAACGG-CGAGCAGCCCAACGG-CGAGCGGCGCGACGG	Design primers
2181484	CGTGCCGGCCGACGTCCCCGCCGACGTGCCCGCCGACGTCCCCGCCGA	Design primers
2191123	GCGCGGGGCGGCGGGGCGAGGAGCGGCGTG	Design primers
2220635	GCG-GCC-GCC-GCT-GCC-GCC-GCG-GCG-GCC	Design primers
2224435	GCGGGTCGACGCGGGGTCGACGCAGGGTCGACG	Design primers
2227112	TGCCGCCGTCGCCGCCGTTGCCGCCGT	Design primers
2236115	ACGACGGCGGCGACGGCGACGACGGCT	Design primers
2236154	GCCCTC-GCCCTC-GCCGTC-GACCTC-GGCCTC	Design primers
2249053	CGTCGACGACGACGTCGCGGTCGA	Design primers
2259567	CCCCTCCGCCGAGGTAGCGCTCCACCCGCCGAGGTAGCGCTCCACCCGCCGAAGTAGCGCACCACCCGCCGAAGTAGCGC	Design primers
2321141	CGACGACGCCGACGGCGACCACGA	Design primers
2321389	GGATCGTCGTCGCGATCGTCGTCCTGATCCTCGTCG	Design primers
2321830	GCGACGAGCACGGTGACGACGTGCACGGCGGCGACGTGCACGGGA	Design primers
2339945	TGCTGCTGCTGGTGGTGCTGCTGG	Design primers
2343536	TCGGCC-TCGGCC-ACGGCC-TCGGCG	Design primers
2407584	GCGCGGCC-GCGCGGCC-GGGCGGCC	Design primers
2417001	GGCGGGCTC-GGCGGGCTC-GGCCGGCTC	Design primers
2418534	GACGTCGACGGCGCCGTCGGCGTC	Design primers
2469253	GTCCGGGTCGGGGTCGGGGGCCGG	Design primers
2470477	GACGGCGACGACGACGCCGACCGC	Design primers
2474675	AGGTCGTGGTGGTGGTCGTGGTCGTGGTCGTGGTCG	Design primers
2485131	CCGCGCCCGTGCTCGCGCCCGTGC	Design primers
2517050	GCGAGGTAGCGCGTCCCTGCGCGAGGTAGCGCGTTCTCGCGCGACGTAGCGCGTGCACGC	Design primers
2526277	TTGTGCGTGCGCTACCTCGGCGCGGCGTGCGCTACCTCGGCGCGGCGTGCGCTACCTCGG	Design primers
2537093	CGACAGGACGCCCGCCAGCACGCCCGACAGGCCGCG	Design primers
2539640	GCGGCGCGCCGCTGCGGGGCGCGCC	Design primers
2543687	CGCCGAGGTAGCGCGTCCTTGCGCGAGGTAGCGCGTTCTTTCGCGAGGTAGCGCATCCTT	Design primers
2551849	GCG-TCG-TCG-TCG-GCG-ACC-TCG-TCG-ACG-TCG-TCG-GCG	Design primers
2557244	GCGGCGTCGGCGGCGGCCGCGGCC	Design primers
2558886	GGCGGAGCCGGCTGAGCCGCCGGAGCC	Design primers
2559005	GGCGGCCGCGGCGGCGCCGGCGGT	Design primers
2563751	GCGGCGCGGCAGCGCGGCGTCGCG	Design primers
2564981	CGGGCT-CGGGCT-GGGGCT-CGGCCT-GGGGCT	Design primers
2595256	GACGTCGTC-GACGTGGTC-GACGTGGTC-GACGTCGTC	Design primers
2606015	CACGACGGCGAGCGCCACCACGGCGAGCACGACGAGCGCGAGCGC	Design primers
2634239	GCCTCGGCGTCGCCCTCGGCGTCGGCCTCC	Design primers
2641160	CCGGCCGGCGCCGCCCGGCGCCCGGCGGCG	Design primers
2647764	AGCGCG-AGCGCG-ATCGCG-AGCGAG	Design primers
2666008	CGGCGCACCCGACGGCACACACGACGGCGGGCCCGA	Design primers
2682713	ACCGTCGGTCAGCCGTTGGTCAACCCTCGGTAA	Design primers
2688721	CCCCGCCGAACGCGGCCCCGCCGGCCGCGGCGCCGCCGGCCGCGG	Design primers
2694187	GTCCCGCGAGGTAGCGCGCT-TCACCGCGAGGTAGCGCGTT-TCACCGCGAGGTAGCGCGTT-TCACCGCGAGGTAGCGCGTT-TCACCGCGAGGTAGCGCGTT	Design primers
2694346	TCGTGGTGCGCTACCTCGCCGGATCGTGCGCTACCTCGCCGGATCGTGCGCTACCTCGCC	Design primers
2700236	CCACGAGCACGACGACGACCGCGA	Design primers
2700356	CGCCGATGCCGATGCCGACGCCGTCGACGA	Design primers
2708145	TCGGCA-CCGGCA-CCGGCA-CCGGCA	Design primers
2709002	CGCCGCTCGGCGACGTAGCGCTCCCCGCGGCGAGGTAGCGCTCCGCGCGGCGAGGTAGCG	Design primers
2714937	CGCGAAGTAGCGCGGCACGG-CGCGAAGTAGCGCGGCACGG-CGCGAAGTAGCGCGGGCACG	Design primers
2715023	CTTTCGCGTGCTACCTCGCCGGTTCCCGCGCTACCTCGCCGGTTCCCGCGCTACCTCGCC	Design primers
2715084	GTTGCCGCGCTACCTCGGCGAATCCCGCGCTACCTCGCCGGTTGCCGCGCTACCTCGCCGGTTCCCGCGCTACCTCGGCGAATCCCGCGCTACCTCGGCG	Design primers
2721363	AGGTAGCGCACTTCTCGCCGAGGTAGCGCACTTCTCGCCAAGGTAGCGCGTCCCTCGCCGACGTAGCGCGTTTCTCGACG	Design primers
2721455	CCCGCGCGCTACCTCGCGACGCGCCGCGCTACCTCGCCACCTGCCGCGCTACGTCGCGAC	Design primers
2728932	ACGGGGAGGGCGACGGTGAGGACGACGGCGAGGGTG	Design primers
2729740	CGCGCGCGAAGTAGCGCCGCGCCTCGCGAGGTAGCGCCGCGCTCCGCGAAGTAGCGCCGC	Design primers
2729921	GAGAAACGCGCTACCTCGCGGAGCGAAGCGCTACCTCGCGGCAGAACGCGCTACCTGGCG	Design primers
2736912	TCGCCGAGGTAGCGCTGCGC-CTCGCGAGGTAGCGCTGCGC-CTCGCGAGGTAGCGCTGCGC-CTCGCGAGGTAGCGCTGCGC-CTCGCGAGGTAGCGCTGCGC	Design primers
2737134	TCGGCGGCGCGGCAAGCGCTACCTCGGCGCGGCAAGCGCTACCTCGGCGCGGCGAGCGCTACCTCGGCGCGGCGAGCGCTACCTCGGCGCGGCGAGCGCT	Design primers
2738229	AACGCGCTACCTCGCGGAACGACGCGCTACTTCGGCGAACGACGCGCTACCTCGCCGGAC	Design primers
2746080	GCTCGAGGTCGAGCACGAGGTCGA	Design primers
2750006	TCGCCGCGAAACGCGCTACCTCGCCGCGAAACGTGCTACCTCGGCGCAGGACGCGCTACCTCGGCGAGAAATGCGCTACC	Design primers
2753851	CGA-CGA-GGA-CGA-CGA-GGA-CGA-CGA	Design primers
2753889	CGGGCT-CCGGCT-CCGGCT-CGGGCT-CGGGCT	Design primers
2761183	GGCAGCGCGCTACCTCGCGACGAAACGCGCTACCTCGCGGAAAGGCGCGCTACCTCGCGA	Design primers
2763723	GCGGTCGTC-GCGGTCGTC-GCCGTCGTC	Design primers
2766328	GCGGCGGCCGCGGCGGAGGCGGCC	Design primers
2767865	GCGGCGGCCGCGGCGACGGCGGCC	Design primers
2775275	CGTCGTCCTCGTCGTCCTCGTCGG	Design primers
2789411	ACGACGACGAAGAGGACGACGCCG	Design primers
2804961	CGTCGTCGGGCCGCGCCCCGGAGTCGTCGGGCCGCGTCCCGGAGTCGTCCGGCCCCGTCCCGG	Design primers
2814869	CGTCGC-CGTCGC-CGTCCC-CGTCGG	Design primers
2822087	GCTCCG-GCTCCG-GCTCGG-GCTCGG-GCTCCG	Design primers
2823222	GCGCTCGAGGCGGTCGAGGCGCTCGAG	Design primers
2823298	CCGGCT-CGGGCT-CGGGCT-CCGGCT	Design primers
2843221	GCCGGGCCGCGCCCGGCCGGGCCGG	Design primers
2846610	GGCGGGTTCGGCGGCTCGGGCGGGTTCGGCGGCTCCGGAGGCTTCGGCGGGTCG	Design primers
2849487	CGCGAGGGCGAGCGTGAGCGCGAGCGCGAC	Design primers
2852221	TGCTCGCGCTCGGGCTCGTGCTCG	Design primers
2868571	GAAACGCGCTACCTCGGCGAGAGACGCGCTACCTCGGCGGAGAACGCGCTACCTCGCGGA	Design primers
2889775	GCCGCGCGAGGTAGCGCACC-ACCCGCCGAGGTAGCGCACC-ACCCGCCGAGGTAGCGCACC-GCCCGCCGAGGTAGCGCACC	Design primers
2898022	CGGCGCGGG-CGGCGCGGG-CGGCGCCGG	Design primers
2898677	GGCGGCGCGGGCGGGGCGGGCGGCGCC	Design primers
2902568	GCGACGGCGTCGGCGACCGCGTCG	Design primers
2907909	GACGCGACGTAGCGCGTTCCGCCGCGAGGTAGCGCGTCTCGCCGCGACGTAGCGCGGCCG	Design primers
2907970	CGCGCTACTTCGCCGGGTCGGGCGCTACTTCGCCGCCTCGGGCGCTACTTCGCCGGCTCG	Design primers
2912461	CTCCACCCGCGAGGTAGCGC-TCCACCCCGCGAGGTAGCGC-TCCACCCCGCGAGGTAGCGC-TCCACCCCGCGAGGTAGCGC	Design primers
2913980	TAGCGCTACCTCGCCGAGCG-GAGCGCTACCTCGCGGCGTG-CAGCGCTACCTCGCGGCGTG-CAGCGCTACCTCGCGGCGTG	Design primers
2915372	TCGTACGAC-CCGTACGAC-CCGTACGAC-CCGTACGAC	Design primers
2915668	GGGCGCCGGCGCGGGCGGGGGCGG	Design primers
2920994	ATCCGCCGAAGTAGCGCAGGATCCGGCGAGGTAGCGCGCGATCGGGCGAGGTAGCGCGGG	Design primers
2925478	CCCCTGGCGAGGTAGCGCGTTTCGTCGCGAGGTAGCGCGTTTCGTCGCGAGGTAGCGCGT	Design primers
2927713	GCCTCGTCGGCCGCGTCGTCGCCCGCGTCGTCGGCC	Design primers
2931558	CGAGGTAGCGCGTCATCCGCCGAGGTAGCGCTCCGGCCGC-CGAGGTAGCGCGTCATCCGCCGAGGTAGCGCTCCGGCCGC-CGAGGTAGCGCGTCATCCGCCGAGGTAGCGCTCCGGCCGC-CGAGGTAGCGCGTCATCCGC	Design primers
2934468	GCGTCG-GCGTCG-GCCTCG-CCGTCG	Design primers
2945066	GGCGGCGGTGGCGGCGACGGCGGC	Design primers
2945110	CGGCGGCGGCAACGGTGGTGGCGGCGACGGTGACGGCGGCGACGG	Design primers
2954407	CGTCGTCGTGGTCGGCGTCGGCGT	Design primers
2964747	TGAGATTCACCCGCCGAGGT-AGCGCTGCACCCGCCGAGGT-AGCGCTGCACCCGCCGAGGT-AGCGCTGCACCCGCCGAGGT	Design primers
2965671	AGCGCTACCTCGTGGAGCGCAGCGCTACCTCGCGGAGAAACGCGCTACCTCGCCGAGTGC	Design primers
2984879	TCGTTTCCGGCTCGCTGGGTGCCGGCTCGCTCGGCGCCGGCTCGC	Design primers
2985057	GTCCTCGCGCGCTACCTCGGCGTCCGGCCGCGCTACTTCGGCGTCCTCGCGCGCTACCTCGGC	Design primers
2987972	AGCCCGAGCCCCAGCGCGAGCCCG	Design primers
2988098	TCTCGTCGTTCGTCGGGTCGTCGGTCGTCGGGTCGTCGTTCGCCG	Design primers
2998816	GCGAGCGCCGGGGTGCGCCGGGGACCGCCG	Design primers
3005362	AACGGAGCGCTACTTCGGCGAGTCCAGCGCTACTTCGGCGAGTCGAGCGCTACCTCGGCG	Design primers
3023131	GCGCTACCTCGCCGGATGGTGCGCTACCTCGGCGGATGGGGCGCTACCTCGGCGCGGGGTGCGCTACCTCGGCGTGCGGT	Design primers
3078788	GTCGGCGTCGGAGCCGGCGTCGGG	Design primers
3085074	GCAGCACGAGCAGCCCGAGCACCACGA	Design primers
3093386	CTCCCGCCGAGGTAGCGCCTTCTCCGCCGAGGTAGCGCGTCCCGCGCCGAAGTAGCGCGT	Design primers
3106827	TCGGGCTCGGCGGGCTCGTCGGGCACG	Design primers
3116074	TCC-GCC-GCC-GCC-TTC-ACC-GCC-GCC-ACC-GCC-ACC-GCC	Design primers
3117232	CGAGGGACGCGCTACCTCGG-CGCGCGGTGCGCTACCTCGG-CGCGCGGTGCGCTACCTCGG-CGCGCGGTGCGCTACCTCGG	Design primers
3135644	CGGCCGGCTCCTCGACAG-GTGCCGGCTCCTCGACAG-GTGCCGGCTTCTCGACAG	Design primers
3157161	GCGCTACCTCGGCGGGAGACGCGCTACGTCGGCGAGGAACGCGCTACGTCGGCGGGAGACGCGCTACGTCGGCGAGGAAC	Design primers
3166950	GGCGTC-GGCGTC-GCCGTC-GGCGCC	Design primers
3188275	GCGAGGTAGCGCAGGATTCGCCGAGGTAGCGCACGGTTGGCCGACGTAGCGCAGGATTCG	Design primers
3188496	GCGCTACCTCGCGGTCCCGAGCGCTACCTCGGCATCGCGAGCGCTACCTCGCGACCTCGC	Design primers
3205288	CGGCTTCGGCCCGGGCTTCGGGCCTGGCTTCGGGCCCGGCTTCGGACC	Design primers
3208713	CGGGGGTCGTGGGGCGGGGGTTCGTGGCGCGGGTGGTCGTGGGGT	Design primers
3213128	GGCCACGGCGACCACGGCGACCACGGC	Design primers
3219286	CCGCGACGGCGACCGCGACCGCGG	Design primers
3245711	GTG-CTG-GTG-GTG-CTC-GTG-GTG-CTG-GTG	Design primers
3281529	CCCGCCGCCGTTGCCGTCACCACCGCCGCCGTCGCCGTCACCACCGTCGCCGTTGCCGTTGCC	Design primers
3286205	GCGGACGCGCTACCTCGCCGGACCAAGCGCTACCTCGCCGGACCAAGCGCTACCTCGCCG	Design primers
3305556	TGTCGAGGTCGATGTCGCCGTCGA	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

19178

GAGAGCGCTGGAGTTGGCGAGGTAGCGCTGGAGTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGGCTTGGCGAGGTAGCGCTGGAGTTGGCGAGGTAGCGCTGGGCTTGGCGA